Protein Domain : IPR005100

Type:  Domain Name:  Transcription elongation factor Spt5, NGN domain
Description:  Spt5p and prokaryotic NusG are shown to contain a novel 'NGN' domain. The combined NGN and KOW motif regions of Spt5 form the binding domain with Spt4 []. Spt5 complexes with Spt4 as a 1:1 heterodimer snf this Spt5-Spt4 complex regulates early transcription elongation by RNA polymerase II and has an imputed role in pre-mRNA processing via its physical association with mRNA capping enzymes. The Schizosaccharomyces pombecore Spt5-Spt4 complex is a heterodimer bearing a trypsin-resistant Spt4-binding domain within the Spt5 subunit []. Short Name:  TF_Spt5_NGN-domain

0 Child Features

0 Contains

1 Cross References

Identifier
PF03439

1 Found In

DB identifier Type Name
IPR017071 Family Transcription elongation factor Spt5

0 GO Annotation

0 Ontology Annotations

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
96727 D8RM04 PAC:15410061 Selaginella moellendorffii 1003  
evm.model.supercontig_188.8 PAC:16411774 Carica papaya 1039  
evm.model.supercontig_53.150 PAC:16422215 Carica papaya 1801  
29898.m000064 B9T6Z6 PAC:16812417 Ricinus communis 1547  
27985.m000887 B9SJK4 PAC:16799730 Ricinus communis 1045  
Cucsa.317390.1 PAC:16977149 Cucumis sativus 536  
Cucsa.077110.1 PAC:16955900 Cucumis sativus 1041  
orange1.1g000252m PAC:18113747 Citrus sinensis 1780  
orange1.1g000294m PAC:18113748 Citrus sinensis 1711  
orange1.1g000247m PAC:18113746 Citrus sinensis 1790  
orange1.1g003225m A0A067H7N9 PAC:18092339 Citrus sinensis 838  
orange1.1g001639m A0A067GVD5 PAC:18092338 Citrus sinensis 1039  
orange1.1g003213m A0A067H7N9 PAC:18092340 Citrus sinensis 838  
orange1.1g001506m A0A067GV45 PAC:18092337 Citrus sinensis 1065  
AT4G08350.1 Q9STN3 PAC:19647724 Arabidopsis thaliana 1041  
AT5G04290.1 F4JW79 PAC:19667185 Arabidopsis thaliana 1493  
AT2G34210.1 O80770 PAC:19638922 Arabidopsis thaliana 989  
Thhalv10017893m V4NYL5 PAC:20180844 Eutrema salsugineum 797  
Thhalv10015730m V4L0A1 PAC:20204259 Eutrema salsugineum 936  
Thhalv10015856m V4LKJ1 PAC:20206734 Eutrema salsugineum 690  
Thhalv10028382m V4L527 PAC:20197245 Eutrema salsugineum 1034  
Ciclev10000121m V4SIR3 PAC:20785381 Citrus clementina 1039  
Ciclev10030480m V4TDU8 PAC:20803177 Citrus clementina 1807  
Lus10028630 PAC:23164480 Linum usitatissimum 1037  
Lus10038680 PAC:23143130 Linum usitatissimum 1430  
Lus10037946 PAC:23163728 Linum usitatissimum 1867  
Lus10018928 PAC:23144664 Linum usitatissimum 1037  
Potri.009G124200.1 PAC:26987938 Populus trichocarpa 1048  
Potri.009G124200.2 PAC:26987940 Populus trichocarpa 1042  
Potri.009G124200.3 PAC:26987939 Populus trichocarpa 1047  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            12202748
            19460865