Protein Domain : IPR014560

Type:  Family Name:  Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
Description:  There is currently no experimental data for members of this group. However, the proteins are distantly related to the archaeal DNA/RNA-binding protein Alba, also called histone-like protein (), and its eukaryotic homologues RNase P/MRP subunits Pop7/Rpp20 () and Rpp25 (). Therefore, members of this group can be predicted to be involved in RNA and/or DNA binding.Structural comparisons have shown that Alba (Sso10b2 from the thermoacidophilic archaeon Sulfolobus solfataricus) is topologically similar to several RNA-binding proteins (or A-DNA-binding) and includes IF3-C, YhhP, and DNase I. All of them have a similar IF3-C fold [, ] and it has been suggested that the ancestral function of the IF3-C fold is related to RNA interaction, and that the Alba superfamily proteins originated as RNA-binding proteins that formed various ribonucleoprotein complexes, probably including RNase P, and were then recruited as a chromosomal protein within the crenarchaeal lineage []. Based on this, it has been suggested that the archaeal Alba proteins () are involved in RNA binding as well as DNA binding [, ], a prediction that has been confirmed experimentally [].For more information about Alba, please see . Short Name:  UCP030333_Alba

0 Child Features

0 Contains

1 Cross References

Identifier
PIRSF030333

0 Found In

0 GO Annotation

0 Ontology Annotations

1 Parent Features

DB identifier Type Name
IPR002775 Family DNA/RNA-binding protein Alba-like

980 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
141130 D8QUM1 PAC:15407232 Selaginella moellendorffii 137  
86023 D8R6I3 PAC:15419802 Selaginella moellendorffii 128  
evm.model.supercontig_115.7 PAC:16406237 Carica papaya 146  
evm.model.supercontig_75.47 PAC:16425886 Carica papaya 129  
29848.m004648 B9RP66 PAC:16811303 Ricinus communis 128  
28320.m001111 B9SEQ3 PAC:16800562 Ricinus communis 130  
Cucsa.131980.1 PAC:16962480 Cucumis sativus 131  
Cucsa.133090.1 A0A0A0LG69 PAC:16962673 Cucumis sativus 143  
Cucsa.292840.1 A0A0A0LZB6 PAC:16975339 Cucumis sativus 130  
orange1.1g034214m A0A067F6H6 PAC:18113249 Citrus sinensis 101  
orange1.1g038360m A0A067EC31 PAC:18106700 Citrus sinensis 149  
orange1.1g032942m A0A067GNN2 PAC:18097129 Citrus sinensis 130  
AT1G29250.1 Q9LP53 PAC:19658162 Arabidopsis thaliana 130  
AT2G34160.1 O22969 PAC:19638925 Arabidopsis thaliana 130  
Thhalv10017422m V4LNB1 PAC:20181098 Eutrema salsugineum 126  
Thhalv10017416m V4NYL1 PAC:20181097 Eutrema salsugineum 130  
Thhalv10009096m V4K8I1 PAC:20185586 Eutrema salsugineum 130  
Ciclev10009883m V4TUK2 PAC:20796122 Citrus clementina 130  
Lus10043279 PAC:23168181 Linum usitatissimum 135  
Lus10019423 PAC:23181501 Linum usitatissimum 135  
Potri.013G042900.1 B9I5H3 PAC:26995906 Populus trichocarpa 157  
Gorai.013G233800.1 A0A0D2W8S4 PAC:26789667 Gossypium raimondii 132  
Gorai.009G018500.1 A0A0D2Q7D1 PAC:26767178 Gossypium raimondii 130  
Gorai.009G010100.1 A0A0D2TH32 PAC:26766352 Gossypium raimondii 122  
Gorai.010G064500.1 A0A0D2SNN6 PAC:26758307 Gossypium raimondii 130  
Thecc1EG026310t1 A0A061F104 PAC:27420827 Theobroma cacao 125  
Thecc1EG038055t1 A0A061GMB6 PAC:27426250 Theobroma cacao 130  
Thecc1EG038396t1 A0A061GPW4 PAC:27427522 Theobroma cacao 130  
Migut.D01061.1.p A0A022Q7I1 PAC:28928735 Mimulus guttatus 131  
Migut.K00476.1.p A0A022Q317 PAC:28937652 Mimulus guttatus 129  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            14519199
            12837780
            14651642