Protein Domain : IPR028589

Type:  Family Name:  AdoMet-dependent rRNA methyltransferase, Spb1
Description:  Spb1 is an adoMet-dependent rRNA methyltransferase required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit []. In Saccharomyces cerevisiae, it specifically methylates the guanosine in position 2922 of the 25S rRNA at the stage of 27S pre-rRNA maturation []. It interacts with the snoRNA-associated proteins Nop1 and Nop58 []. FTSJ3, Spb1 homologue in humans, is associates with NIP7 (involved in the biogenesis of 40S subunit) and functions in pre-rRNA processing []. Short Name:  Spb1
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0 Child Features

0 Contains

2 Cross Referencess

Identifier
PTHR10920:SF13
MF_03163

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0008649 IPR028589
GO:0031167 IPR028589

2 Ontology Annotations

GO Term Gene Name
GO:0008649 IPR028589
GO:0031167 IPR028589

1 Parent Features

DB identifier Type Name
IPR015507 Family Ribosomal RNA large subunit methyltransferase E

451 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
141188 PAC:15407353 Selaginella moellendorffii 830  
438129 D8QUB2 PAC:15418824 Selaginella moellendorffii 639  
78506 PAC:15422107 Selaginella moellendorffii 830  
evm.TU.contig_31087.2 PAC:16429931 Carica papaya 480  
evm.TU.contig_31087.1 PAC:16429930 Carica papaya 119  
evm.TU.contig_45708.1 PAC:16432210 Carica papaya 87  
evm.model.supercontig_62.164 PAC:16423966 Carica papaya 829  
evm.model.supercontig_62.165 PAC:16423967 Carica papaya 197  
evm.model.supercontig_62.166 PAC:16423968 Carica papaya 277  
evm.model.supercontig_62.168 PAC:16423970 Carica papaya 139  
evm.model.supercontig_62.167 PAC:16423969 Carica papaya 127  
evm.model.supercontig_84.126 PAC:16427289 Carica papaya 119  
evm.model.supercontig_84.127 PAC:16427290 Carica papaya 1218  
30131.m007053 B9RH61 PAC:16818878 Ricinus communis 828  
Cucsa.109520.1 PAC:16959884 Cucumis sativus 855  
Cucsa.109520.2 PAC:16959885 Cucumis sativus 685  
orange1.1g003302m A0A067DSK3 PAC:18113058 Citrus sinensis 832  
AT4G25730.1 F4JTD2 PAC:19643814 Arabidopsis thaliana 821  
Thhalv10024417m V4P5G2 PAC:20194286 Eutrema salsugineum 821  
Ciclev10027844m PAC:20812397 Citrus clementina 804  
Lus10023555 PAC:23160540 Linum usitatissimum 831  
Lus10040439 PAC:23173988 Linum usitatissimum 822  
Potri.009G118400.1 A0A2K1Z6I9 PAC:26985874 Populus trichocarpa 840  
Gorai.005G244600.1 A0A0D2RL39 PAC:26806359 Gossypium raimondii 852  
15546 I0YZF9 PAC:27386905 Coccomyxa subellipsoidea C-169 361  
7364 C1MYY7 PAC:27344214 Micromonas pusilla CCMP1545 197  
60535 C1MYY6 PAC:27344208 Micromonas pusilla CCMP1545 647  
72779 C1E7N5 PAC:27401971 Micromonas sp RCC299 200  
89243 A4S846 PAC:27417452 Ostreococcus lucimarinus 645  
89244 A4S847 PAC:27417375 Ostreococcus lucimarinus 376  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            10556316
            15546625
            10648622
            22195017