Protein Domain : IPR001662

Type:  Domain Name:  Translation elongation factor EF1B, gamma chain, conserved
Description:  Translation elongation factors are responsible for two main processes during protein synthesis on the ribosome [, , ]. EF1A (or EF-Tu) is responsible for the selection and binding of the cognate aminoacyl-tRNA to the A-site (acceptor site) of the ribosome. EF2 (or EF-G) is responsible for the translocation of the peptidyl-tRNA from the A-site to the P-site (peptidyl-tRNA site) of the ribosome, thereby freeing the A-site for the next aminoacyl-tRNA to bind. Elongation factors are responsible for achieving accuracy of translation and both EF1A and EF2 are remarkably conserved throughout evolution.Elongation factor EF1B (also known as EF-Ts or EF-1beta/gamma/delta) is a nucleotide exchange factor that is required to regenerate EF1A from its inactive form (EF1A-GDP) to its active form (EF1A-GTP). EF1A is then ready to interact with a new aminoacyl-tRNA to begin the cycle again. EF1B is more complex in eukaryotes than in bacteria, and can consist of three subunits: EF1B-alpha (or EF-1beta), EF1B-gamma (or EF-1gamma) and EF1B-beta (or EF-1delta) [].This entry represents a conserved domain usually found near the C terminus of EF1B-gamma chains, a peptide of 410-440 residues. The gamma chain appears to play a role in anchoring the EF1B complex to the beta and delta chains and to other cellular components. Short Name:  Transl_elong_EF1_G_con

0 Child Features

0 Contains

4 Cross Referencess

Identifier
PF00647
PS50040
G3DSA:3.30.70.1010
SSF89942

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0003746 IPR001662
GO:0006414 IPR001662

2 Ontology Annotations

GO Term Gene Name
GO:0003746 IPR001662
GO:0006414 IPR001662

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
404114 D8QUB6 PAC:15407710 Selaginella moellendorffii 228  
98733 D8RPJ6 PAC:15415947 Selaginella moellendorffii 418  
evm.TU.contig_35333.1 PAC:16430631 Carica papaya 237  
evm.TU.contig_44772.1 PAC:16432078 Carica papaya 42  
evm.model.supercontig_113.26 PAC:16406035 Carica papaya 149  
29765.m000725 B9SKB3 PAC:16808194 Ricinus communis 307  
Cucsa.114250.1 PAC:16960384 Cucumis sativus 410  
orange1.1g025218m A0A067DDP8 PAC:18098068 Citrus sinensis 256  
orange1.1g025196m A0A067DDP8 PAC:18098069 Citrus sinensis 256  
orange1.1g025195m A0A067DDP8 PAC:18098070 Citrus sinensis 256  
orange1.1g030158m A0A067DQW1 PAC:18098071 Citrus sinensis 182  
orange1.1g021153m A0A067DPN2 PAC:18098065 Citrus sinensis 316  
orange1.1g021165m A0A067DPN2 PAC:18098066 Citrus sinensis 316  
orange1.1g023090m A0A067DHE6 PAC:18098067 Citrus sinensis 287  
orange1.1g014592m A0A067DIG0 PAC:18094271 Citrus sinensis 422  
orange1.1g016550m A0A067DMG0 PAC:18094272 Citrus sinensis 387  
orange1.1g021466m A0A067DVY3 PAC:18094273 Citrus sinensis 312  
AT1G09640.2 C0Z2L8 PAC:19651341 Arabidopsis thaliana 265  
AT1G09640.1 O04487 PAC:19651340 Arabidopsis thaliana 414  
AT1G57720.1 Q9FVT2 PAC:19656146 Arabidopsis thaliana 413  
AT1G57720.2 Q9FVT2 PAC:19656147 Arabidopsis thaliana 413  
Thhalv10007759m V4KDU2 PAC:20186844 Eutrema salsugineum 413  
Thhalv10023561m V4KQN5 PAC:20201478 Eutrema salsugineum 350  
Thhalv10023493m V4MEH0 PAC:20201476 Eutrema salsugineum 414  
Thhalv10023494m V4MEH0 PAC:20201477 Eutrema salsugineum 414  
Ciclev10003566m V4SB84 PAC:20785444 Citrus clementina 418  
Ciclev10020303m V4TN38 PAC:20806353 Citrus clementina 422  
Lus10033213 PAC:23178049 Linum usitatissimum 617  
Lus10007148 PAC:23175291 Linum usitatissimum 419  
Lus10007150 PAC:23175301 Linum usitatissimum 458  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            12932732
            15922593
            12762045