Protein Domain : IPR008881

Type:  Domain Name:  Trigger factor, ribosome-binding, bacterial
Description:  In the Escherichia colicytosol, a fraction of the newly synthesised proteins requires the activity of molecular chaperones for folding to the native state. The major chaperones implicated in this folding process are the ribosome-associated Trigger Factor (TF), and the DnaK and GroEL chaperones with their respective co-chaperones. Trigger Factor is an ATP-independent chaperone and displays chaperone and peptidyl-prolyl-cis-trans-isomerase (PPIase) activities in vitro. It is composed of at least three domains, an N-terminal domain which mediates association with the large ribosomal subunit, a central substrate binding and PPIase domain with homology to FKBP proteins, and a C-terminal domain of unknown function. The positioning of TF at the peptide exit channel, together with its ability to interact with nascent chains as short as 57 residues renders TF a prime candidate for being the first chaperone that binds to the nascent polypeptide chains []. This group of sequences contain the ribosomal subunit association domain. Short Name:  Trigger_fac_ribosome-bd_bac

0 Child Features

0 Contains

3 Cross Referencess

Identifier
PF05697
G3DSA:3.30.70.1050
SSF102735

1 Found In

DB identifier Type Name
IPR005215 Family Trigger factor

2 GO Annotations

GO Term Gene Name
GO:0006457 IPR008881
GO:0015031 IPR008881

2 Ontology Annotations

GO Term Gene Name
GO:0006457 IPR008881
GO:0015031 IPR008881

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
78010 D8QUI7 PAC:15418430 Selaginella moellendorffii 440  
271393 D8S8I5 PAC:15422518 Selaginella moellendorffii 495  
evm.model.supercontig_284.5 PAC:16416062 Carica papaya 573  
evm.model.supercontig_80.77 PAC:16426804 Carica papaya 354  
evm.model.supercontig_9.356 PAC:16428264 Carica papaya 207  
evm.model.supercontig_9.357 PAC:16428265 Carica papaya 233  
29668.m000327 B9SQI6 PAC:16805216 Ricinus communis 417  
29640.m000411 B9SYY0 PAC:16804464 Ricinus communis 542  
29641.m000384 B9SX52 PAC:16804488 Ricinus communis 216  
29641.m000383 B9SX51 PAC:16804487 Ricinus communis 187  
Cucsa.042740.1 PAC:16952972 Cucumis sativus 538  
Cucsa.348540.2 A0A0A0KBW0 PAC:16979622 Cucumis sativus 208  
Cucsa.348540.1 PAC:16979621 Cucumis sativus 209  
Cucsa.348550.1 A0A0A0K988 PAC:16979623 Cucumis sativus 233  
Cucsa.348550.2 PAC:16979624 Cucumis sativus 199  
orange1.1g008989m A0A067F7M0 PAC:18100068 Citrus sinensis 547  
orange1.1g009190m A0A067F417 PAC:18100069 Citrus sinensis 540  
orange1.1g013922m A0A067FG07 PAC:18100070 Citrus sinensis 434  
orange1.1g028445m A0A067ENA0 PAC:18098330 Citrus sinensis 209  
orange1.1g025721m A0A067EBE9 PAC:18098291 Citrus sinensis 249  
orange1.1g029830m A0A067EBF5 PAC:18098293 Citrus sinensis 187  
orange1.1g029914m A0A067EES7 PAC:18098295 Citrus sinensis 185  
orange1.1g029820m A0A067EBF5 PAC:18098294 Citrus sinensis 187  
orange1.1g031041m A0A067EMG8 PAC:18098296 Citrus sinensis 167  
orange1.1g025691m A0A067EMG4 PAC:18098290 Citrus sinensis 249  
orange1.1g026074m A0A067EB32 PAC:18098292 Citrus sinensis 244  
orange1.1g031255m A0A067ENA5 PAC:18098297 Citrus sinensis 163  
orange1.1g039081m A0A067FH45 PAC:18115462 Citrus sinensis 392  
AT5G53860.2 Q93W26 PAC:19666869 Arabidopsis thaliana 422  
AT5G55220.1 Q8S9L5 PAC:19669108 Arabidopsis thaliana 547  

1 Publications

First Author Title Year Journal Volume Pages PubMed ID
            12603737