Gene : Zosma38g00880 Z. marina v2.2
Defline:  (1 of 2) K01956 - carbamoyl-phosphate synthase small subunit (carA, CPA1) Genomic Order:  85
Name:  ? Zosma38g00880 Secondary Identifier:  ? PAC:33166323
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Zmarina ARGSYNBSUB-PWY Zostera marina pathologic  
Zmarina ARGSYN-PWY Zostera marina pathologic  
Zmarina CITRULBIO-PWY Zostera marina pathologic  
Zmarina GLUTAMINDEG-PWY Zostera marina pathologic  
Zmarina PWY0-162 Zostera marina pathologic  
Zmarina PWY-4984 Zostera marina pathologic  
Zmarina PWY-5686 Zostera marina pathologic  
Zmarina PWY-7211 Zostera marina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Zosma38g00880 0.5kb upstream 0.5kb upstream 4609 true scaffold_38: 586034-590642 Zostera marina
Zosma38g00880 0.5kb upstream 0.5kb upstream 500 false scaffold_38: 586034-586533 Zostera marina
Zosma38g00880 0.5kb downstream 0.5kb downstream 4609 true scaffold_38: 586534-591142 Zostera marina
Zosma38g00880 0.5kb downstream 0.5kb downstream 500 false scaffold_38: 590643-591142 Zostera marina
Zosma38g00880 1.0kb upstream 1.0kb upstream 5109 true scaffold_38: 585534-590642 Zostera marina
Zosma38g00880 1.0kb upstream 1.0kb upstream 1000 false scaffold_38: 585534-586533 Zostera marina
Zosma38g00880 1.0kb downstream 1.0kb downstream 5109 true scaffold_38: 586534-591642 Zostera marina
Zosma38g00880 1.0kb downstream 1.0kb downstream 1000 false scaffold_38: 590643-591642 Zostera marina
Zosma38g00880 2.0kb upstream 2.0kb upstream 6109 true scaffold_38: 584534-590642 Zostera marina
Zosma38g00880 2.0kb upstream 2.0kb upstream 2000 false scaffold_38: 584534-586533 Zostera marina
Zosma38g00880 2.0kb downstream 2.0kb downstream 6109 true scaffold_38: 586534-592642 Zostera marina
Zosma38g00880 2.0kb downstream 2.0kb downstream 2000 false scaffold_38: 590643-592642 Zostera marina
Zosma38g00880 5.0kb upstream 5.0kb upstream 9109 true scaffold_38: 581534-590642 Zostera marina
Zosma38g00880 5.0kb upstream 5.0kb upstream 5000 false scaffold_38: 581534-586533 Zostera marina
Zosma38g00880 5.0kb downstream 5.0kb downstream 9109 true scaffold_38: 586534-595642 Zostera marina
Zosma38g00880 5.0kb downstream 5.0kb downstream 5000 false scaffold_38: 590643-595642 Zostera marina
Zosma38g00880 10.0kb upstream 10.0kb upstream 14109 true scaffold_38: 576534-590642 Zostera marina
Zosma38g00880 10.0kb upstream 10.0kb upstream 10000 false scaffold_38: 576534-586533 Zostera marina
Zosma38g00880 10.0kb downstream 10.0kb downstream 14109 true scaffold_38: 586534-600642 Zostera marina
Zosma38g00880 10.0kb downstream 10.0kb downstream 10000 false scaffold_38: 590643-600642 Zostera marina

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046797 5273 Angiosperm View MSA
121347244 5274 Embryophyte View MSA
123423822 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain