Gene : Zosma70g00580 Z. marina v2.2
Defline:  (1 of 1) K06443 - lycopene beta-cyclase (lcyB, crtL1, crtY) Genomic Order:  57
Name:  ? Zosma70g00580 Secondary Identifier:  ? PAC:33168844
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Zmarina CAROTENOID-PWY Zostera marina pathologic  
Zmarina PWY-5943 Zostera marina pathologic  
Zmarina PWY-5947 Zostera marina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Zosma70g00580 0.5kb upstream 0.5kb upstream 2033 true scaffold_70: 413866-415898 Zostera marina
Zosma70g00580 0.5kb upstream 0.5kb upstream 500 false scaffold_70: 415399-415898 Zostera marina
Zosma70g00580 0.5kb downstream 0.5kb downstream 2033 true scaffold_70: 413366-415398 Zostera marina
Zosma70g00580 0.5kb downstream 0.5kb downstream 500 false scaffold_70: 413366-413865 Zostera marina
Zosma70g00580 1.0kb upstream 1.0kb upstream 2533 true scaffold_70: 413866-416398 Zostera marina
Zosma70g00580 1.0kb upstream 1.0kb upstream 1000 false scaffold_70: 415399-416398 Zostera marina
Zosma70g00580 1.0kb downstream 1.0kb downstream 2533 true scaffold_70: 412866-415398 Zostera marina
Zosma70g00580 1.0kb downstream 1.0kb downstream 1000 false scaffold_70: 412866-413865 Zostera marina
Zosma70g00580 2.0kb upstream 2.0kb upstream 3533 true scaffold_70: 413866-417398 Zostera marina
Zosma70g00580 2.0kb upstream 2.0kb upstream 2000 false scaffold_70: 415399-417398 Zostera marina
Zosma70g00580 2.0kb downstream 2.0kb downstream 3533 true scaffold_70: 411866-415398 Zostera marina
Zosma70g00580 2.0kb downstream 2.0kb downstream 2000 false scaffold_70: 411866-413865 Zostera marina
Zosma70g00580 5.0kb upstream 5.0kb upstream 6533 true scaffold_70: 413866-420398 Zostera marina
Zosma70g00580 5.0kb upstream 5.0kb upstream 5000 false scaffold_70: 415399-420398 Zostera marina
Zosma70g00580 5.0kb downstream 5.0kb downstream 6533 true scaffold_70: 408866-415398 Zostera marina
Zosma70g00580 5.0kb downstream 5.0kb downstream 5000 false scaffold_70: 408866-413865 Zostera marina
Zosma70g00580 10.0kb upstream 10.0kb upstream 11533 true scaffold_70: 413866-425398 Zostera marina
Zosma70g00580 10.0kb upstream 10.0kb upstream 10000 false scaffold_70: 415399-425398 Zostera marina
Zosma70g00580 10.0kb downstream 10.0kb downstream 11533 true scaffold_70: 403866-415398 Zostera marina
Zosma70g00580 10.0kb downstream 10.0kb downstream 10000 false scaffold_70: 403866-413865 Zostera marina

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046204 5273 Angiosperm View MSA
121345644 5274 Embryophyte View MSA
123423874 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain