Protein Domain : IPR029411

Type:  Domain Name:  Rhamnogalacturonan lyase, domain III
Description:  This is domain III of rhamnogalacturonan lyase (RG-lyase). The full-length protein specifically recognises and cleaves alpha-1,4 glycosidic bonds between l-rhamnose and d-galacturonic acids in the backbone of rhamnogalacturonan-I, a major component of the plant cell wall polysaccharide, pectin. This domain possesses a jelly roll beta-sandwich fold structurally homologous to carbohydrate binding modules (CBMs), and it carries two sulfate ions and a hexa-coordinated calcium ion []. Short Name:  RG-lyase_III
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0 Child Features

0 Contains

1 Cross References

Identifier
PF14683

0 Found In

0 GO Annotation

0 Ontology Annotations

1 Parent Features

DB identifier Type Name
IPR008979 Domain Galactose-binding domain-like

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
413798 D8RQ90 PAC:15416897 Selaginella moellendorffii 667  
413794 D8RQ86 PAC:15416890 Selaginella moellendorffii 561  
425248 D8SSH4 PAC:15403544 Selaginella moellendorffii 702  
evm.TU.contig_29377.1 PAC:16429692 Carica papaya 697  
evm.TU.contig_29377.2 PAC:16429693 Carica papaya 460  
evm.model.supercontig_129.7 PAC:16407575 Carica papaya 479  
evm.model.supercontig_152.24 PAC:16409607 Carica papaya 637  
evm.model.supercontig_177.18 PAC:16411115 Carica papaya 692  
evm.model.supercontig_21.45 PAC:16413556 Carica papaya 627  
29842.m003574 B9RXJ4 PAC:16810707 Ricinus communis 361  
29596.m000701 B9SMY3 PAC:16803398 Ricinus communis 633  
29596.m000706 B9SMY8 PAC:16803403 Ricinus communis 639  
29596.m000705 B9SMY7 PAC:16803402 Ricinus communis 755  
29596.m000702 B9SMY4 PAC:16803399 Ricinus communis 642  
29596.m000707 B9SMY9 PAC:16803404 Ricinus communis 646  
28333.m000572 B9SML0 PAC:16800686 Ricinus communis 676  
28333.m000588 B9SMM6 PAC:16800702 Ricinus communis 621  
Cucsa.045150.1 PAC:16953315 Cucumis sativus 596  
Cucsa.045150.2 PAC:16953316 Cucumis sativus 596  
Cucsa.045150.3 PAC:16953317 Cucumis sativus 522  
Cucsa.103830.1 PAC:16959099 Cucumis sativus 637  
Cucsa.160470.1 A0A0A0LPL0 PAC:16965351 Cucumis sativus 641  
Cucsa.260200.2 PAC:16973132 Cucumis sativus 378  
Cucsa.260200.1 PAC:16973131 Cucumis sativus 406  
Cucsa.312070.1 PAC:16976789 Cucumis sativus 642  
Cucsa.312070.2 PAC:16976790 Cucumis sativus 640  
Cucsa.312070.3 PAC:16976791 Cucumis sativus 632  
Cucsa.312090.1 PAC:16976793 Cucumis sativus 633  
Cucsa.312080.1 PAC:16976792 Cucumis sativus 624  
orange1.1g006741m PAC:18137866 Citrus sinensis 633  

1 Publications

First Author Title Year Journal Volume Pages PubMed ID
            15135077