Protein Domain : IPR027652

Type:  Family Name:  Pre-mRNA-processing-splicing factor 8
Description:  Pre-mRNA-processing-splicing factor 8 (Prp8) is a central component of the spliceosome, which may play a role in aligning the pre-mRNA 5'- and 3'-exons for ligation. It interacts with U5 snRNA, and with pre-mRNA 5'-splice sites in B spliceosomes and 3'-splice sites in C spliceosomes. It is part of the U5 snRNP complex, and of U5.4/6 and U5.U4atac/U6atac snRNP complexes in U2- and U12-dependent spliceosomes, respectively. It is also found in a mRNA splicing-dependent exon junction complex (EJC) with SRRM1 where it interacts with U5 snRNP proteins SNRP116 and WDR57/SPF38 [, ].Mutations of human Prp8 cause retinitis pigmentosa 13, a retinal dystrophy belonging to the group of pigmentary retinopathies []. Short Name:  PRP8

0 Child Features

0 Contains

1 Cross References

Identifier
PTHR11140

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0000398 IPR027652
GO:0005681 IPR027652

2 Ontology Annotations

GO Term Gene Name
GO:0000398 IPR027652
GO:0005681 IPR027652

0 Parent Features

742 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
173603 D8RRR0 PAC:15416251 Selaginella moellendorffii 2367  
evm.model.supercontig_67.49 PAC:16424731 Carica papaya 1140  
evm.model.supercontig_67.48 PAC:16424730 Carica papaya 300  
29841.m002876 B9RV85 PAC:16810589 Ricinus communis 2376  
Cucsa.105510.1 PAC:16959344 Cucumis sativus 2337  
orange1.1g042625m A0A067E0I7 PAC:18134437 Citrus sinensis 2346  
AT4G38780.1 PAC:19644973 Arabidopsis thaliana 2332  
AT1G80070.1 Q9SSD2 PAC:19650608 Arabidopsis thaliana 2359  
Thhalv10024184m V4MRX5 PAC:20195615 Eutrema salsugineum 2390  
Thhalv10025834m PAC:20195252 Eutrema salsugineum 301  
Thhalv10017992m V4JPG7 PAC:20190986 Eutrema salsugineum 2361  
Ciclev10024683m V4RZM0 PAC:20801164 Citrus clementina 2357  
Lus10011489 PAC:23182623 Linum usitatissimum 2368  
Lus10023129 PAC:23170371 Linum usitatissimum 2370  
Potri.012G042900.1 B9I4T4 PAC:27049239 Populus trichocarpa 93  
Potri.001G202900.1 B9GFN3 PAC:27041407 Populus trichocarpa 113  
Potri.001G202400.1 A0A2K2C0S3 PAC:27040506 Populus trichocarpa 233  
Potri.003G031900.1 B9MWN9 PAC:26998169 Populus trichocarpa 2357  
Potri.003G031900.2 PAC:26998170 Populus trichocarpa 2067  
Gorai.009G127700.1 A0A0D2TIS8 PAC:26767783 Gossypium raimondii 2354  
Gorai.009G127700.2 A0A0D2UL43 PAC:26767784 Gossypium raimondii 2165  
Gorai.011G084400.2 A0A0D2T4K3 PAC:26810110 Gossypium raimondii 2354  
Gorai.011G084400.1 A0A0D2T4K3 PAC:26810109 Gossypium raimondii 2354  
28085 I0Z4G5 PAC:27390002 Coccomyxa subellipsoidea C-169 2308  
210656 C1N0C4 PAC:27340284 Micromonas pusilla CCMP1545 2333  
107163 C1FJT4 PAC:27399720 Micromonas sp RCC299 2336  
50795 A4S4B3 PAC:27420348 Ostreococcus lucimarinus 2320  
Thecc1EG027212t4 A0A061G8E2 PAC:27441152 Theobroma cacao 2007  
Thecc1EG027212t2 A0A061GFM4 PAC:27441150 Theobroma cacao 2354  
Thecc1EG027212t3 A0A061G7K9 PAC:27441151 Theobroma cacao 2126  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            15840809
            9774689
            11468273