Protein Domain : IPR016443

Type:  Family Name:  RNA 3'-terminal phosphate cyclase type 2
Description:  RNA cyclases are a family of RNA-modifying enzymes that are conserved in eukaryotes, bacteria and archaea. Type 1 RNA 3'-terminal phosphate cyclases () [, ] catalyse the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA:ATP + RNA 3'-terminal-phosphate = AMP + diphosphate + RNA terminal-2',3'-cyclic-phosphate The physiological function of the cyclase is not known, but the enzyme could be involved in the maintenance of cyclic ends in tRNA splicing intermediates or in the cyclisation of the 3' end of U6 snRNA [].A second subfamily of RNA 3'-terminal phosphate cyclases (type 2) that do not have cyclase activity have been identified in eukaryotes. They are localised to the nucleolus and are involved in ribosomal modification [].This entry represents the type 2 RNA 3'-terminal phosphate cyclases. Short Name:  RNA3'_term_phos_cyc_type_2

0 Child Features

2 Contains

DB identifier Type Name
IPR013792 Domain RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta
IPR020719 Conserved_site RNA 3'-terminal phosphate cyclase-like, conserved site

1 Cross References

Identifier
TIGR03400

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0042254 IPR016443
GO:0005730 IPR016443

2 Ontology Annotations

GO Term Gene Name
GO:0042254 IPR016443
GO:0005730 IPR016443

1 Parent Features

DB identifier Type Name
IPR000228 Family RNA 3'-terminal phosphate cyclase

549 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
173778 D8RS79 PAC:15417166 Selaginella moellendorffii 360  
evm.model.supercontig_56.89 PAC:16422801 Carica papaya 377  
28095.m000097 B9T7D2 PAC:16799926 Ricinus communis 377  
Cucsa.355940.1 A0A0A0LXL4 PAC:16980240 Cucumis sativus 377  
orange1.1g017072m A0A067DYB6 PAC:18101279 Citrus sinensis 378  
AT5G22100.1 Q9C578 PAC:19668850 Arabidopsis thaliana 375  
Thhalv10013826m V4LQP6 PAC:20205932 Eutrema salsugineum 378  
Thhalv10028736m V4LG18 PAC:20197270 Eutrema salsugineum 377  
Thhalv10029476m V4L6L2 PAC:20197538 Eutrema salsugineum 347  
Ciclev10028663m V4RRZ7 PAC:20812438 Citrus clementina 378  
Lus10004092 PAC:23147803 Linum usitatissimum 377  
Lus10013351 PAC:23151410 Linum usitatissimum 377  
Potri.009G016000.2 A0A2K1Z178 PAC:26986754 Populus trichocarpa 323  
Potri.009G016000.1 A0A2K1Z177 PAC:26986753 Populus trichocarpa 376  
Potri.009G016000.3 PAC:26986755 Populus trichocarpa 297  
Potri.001G216400.1 B9GHM4 PAC:27045300 Populus trichocarpa 376  
Gorai.006G116200.1 A0A0D2SVX2 PAC:26830732 Gossypium raimondii 378  
20145 I0YKR8 PAC:27395067 Coccomyxa subellipsoidea C-169 373  
160140 PAC:27344392 Micromonas pusilla CCMP1545 406  
59207 C1E809 PAC:27401857 Micromonas sp RCC299 521  
35655 A4S0I3 PAC:27414261 Ostreococcus lucimarinus 388  
Thecc1EG041228t1 A0A061GTX5 PAC:27429958 Theobroma cacao 517  
Migut.H00888.1.p A0A022R2C9 PAC:28950918 Mimulus guttatus 378  
Araha.24814s0001.1.p PAC:28858854 Arabidopsis halleri 377  
Cagra.0056s0020.1.p PAC:28903236 Capsella grandiflora 375  
Glyma.13G179100.2.p I1M0A4 PAC:30502513 Glycine max 379  
Glyma.13G179100.1.p I1M0A4 PAC:30502514 Glycine max 379  
Glyma.01G143200.1.p K7K3U5 PAC:30543953 Glycine max 300  
Brara.H00390.1.p A0A397Y7P4 PAC:30647659 Brassica rapa FPsc 377  
Brara.J00545.1.p A0A397XIN6 PAC:30612180 Brassica rapa FPsc 377  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            9184239
            2199762
            10790377