Protein Domain : IPR006119

Type:  Domain Name:  Resolvase, N-terminal catalytic domain
Description:  Site-specific recombination plays an important role in DNA rearrangement in prokaryotic organisms. Two types of site-specific recombination are known to occur:Recombination between inverted repeats resulting in the reversal of a DNA segment.Recombination between repeat sequences on two DNA molecules resulting in their cointegration, or between repeats on one DNA molecule resulting in the excision of a DNA fragment.Site-specific recombination is characterised by a strand exchange mechanism that requires no DNA synthesis or high energy cofactor; the phosphodiester bond energy is conserved in a phospho-protein linkage during strand cleavage and re-ligation.Two unrelated families of recombinases are currently known []. The first, called the 'phage integrase' family, groups a number of bacterial phage and yeast plasmid enzymes. The second [], called the 'resolvase' family, groups enzymes which share the following structural characteristics: an N-terminal catalytic and dimerization domain that contains a conserved serine residue involved in the transient covalent attachment to DNA, and a C-terminal helix-turn-helix DNA-binding domain . The N-terminal resolvase/invertase-type recombinase catalytic domain has an AlphaBeta fold and consists of a five-stranded mixed beta-sheet surrounded bythree alpha helices on one side and one helix on the other []. Short Name:  Resolv_N

0 Child Features

1 Contains

DB identifier Type Name
IPR006118 Conserved_site Recombinase, conserved site

5 Cross Referencess

Identifier
PF00239
PS51736
SM00857
G3DSA:3.40.50.1390
SSF53041

0 Found In

3 GO Annotations

GO Term Gene Name
GO:0000150 IPR006119
GO:0003677 IPR006119
GO:0006310 IPR006119

3 Ontology Annotations

GO Term Gene Name
GO:0000150 IPR006119
GO:0003677 IPR006119
GO:0006310 IPR006119

0 Parent Features

348 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
415134 D8RV49 PAC:15417984 Selaginella moellendorffii 118  
31335.m000043 B9TDB5 PAC:16824959 Ricinus communis 297  
27669.m000057 B9T8Z8 PAC:16798930 Ricinus communis 777  
AT4G03620.1 Q9SY40 PAC:19644391 Arabidopsis thaliana 342  
AT5G25070.1 Q8L4Q6 PAC:19671638 Arabidopsis thaliana 736  
AT1G58210.1 PAC:19655946 Arabidopsis thaliana 1246  
Ciclev10031923m V4VFM8 PAC:20803860 Citrus clementina 359  
Lus10040374 PAC:23173827 Linum usitatissimum 168  
Potri.010G059100.1 B9HT86 PAC:26982338 Populus trichocarpa 384  
Potri.008G018300.1 B9HKM9 PAC:27037107 Populus trichocarpa 236  
Gorai.005G168700.2 A0A0D2PU93 PAC:26804642 Gossypium raimondii 425  
Gorai.005G168700.1 A0A0D2PU93 PAC:26804643 Gossypium raimondii 425  
199136 C1N2K7 PAC:27339589 Micromonas pusilla CCMP1545 333  
70792 C1NAC4 PAC:27343729 Micromonas pusilla CCMP1545 371  
14930 A4RVN2 PAC:27415401 Ostreococcus lucimarinus 724  
41452 A4RZB5 PAC:27418186 Ostreococcus lucimarinus 490  
Migut.N02509.1.p A0A022R6K3 PAC:28926017 Mimulus guttatus 161  
Araha.0971s0007.1.p PAC:28844308 Arabidopsis halleri 724  
Cagra.1945s0003.1.p PAC:28901642 Capsella grandiflora 732  
Brara.F01151.1.p A0A397YWG7 PAC:30631712 Brassica rapa FPsc 331  
Brara.A00538.1.p A0A398AIN7 PAC:30638549 Brassica rapa FPsc 301  
Bostr.5763s0014.1.p PAC:30673531 Boechera stricta 722  
Bostr.25993s0562.1.p PAC:30667542 Boechera stricta 190  
Bradi1g14877.2.p PAC:31133300 Brachypodium distachyon 847  
Medtr1g090490.1 B7FJE9 PAC:31092555 Medicago truncatula 235  
Medtr1g090490.2 G7I403 PAC:31092556 Medicago truncatula 219  
Medtr5g034890.1 G7K2R5 PAC:31088977 Medicago truncatula 594  
Spipo7G0019500 PAC:31506598 Spirodela polyrhiza 105  
evm_27.model.AmTr_v1.0_scaffold00016.113 W1PGJ7 PAC:31569726 Amborella trichopoda 481  
Traes_3DS_50B54D1FC.2 PAC:31943351 Triticum aestivum 684  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            3011407
            2896291
            7628011