Protein Domain : IPR023026

Type:  Family Name:  Tryptophan synthase beta chain/beta chain-like
Description:  Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan [, ]:L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit: alpha chain () is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and beta chain is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together on a single multifunctional protein [].The beta chain of the enzyme, represented here, requires pyridoxal-phosphate as a cofactor. The pyridoxal-phosphate group is attached to a lysine residue. The region around this lysine residue also contains two histidine residues which are part of the pyridoxal-phosphate binding site.This entry also contains sequences that represent a family of pyridoxal-phosphate dependent enzymes that are closely related to the beta subunit of tryptophan synthase. However, the only case in which a member of this family replaces a member of TIGR00263 is in Sulfolobus species which contain two sequences which hit this model, one of which is proximal to the alpha subunit. In every other case so far, either the species appears not to make tryptophan (there is no trp synthase alpha subunit), or a trp synthase beta subunit matching TIGR00263 is also found. Short Name:  Trp_synth_beta/beta-like

2 Child Features

DB identifier Type Name
IPR006654 Family Tryptophan synthase, beta chain
IPR006316 Family Tryptophan synthase, beta chain-like

0 Contains

2 Cross Referencess

Identifier
PIRSF001413
MF_00133

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0004834 IPR023026
GO:0000162 IPR023026

2 Ontology Annotations

GO Term Gene Name
GO:0004834 IPR023026
GO:0000162 IPR023026

0 Parent Features

886 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
80089 D8QY28 PAC:15402348 Selaginella moellendorffii 479  
85784 D8R637 PAC:15422264 Selaginella moellendorffii 414  
evm.model.supercontig_198.18 PAC:16412380 Carica papaya 426  
evm.model.supercontig_97.46 PAC:16429082 Carica papaya 467  
29842.m003632 B9RXQ0 PAC:16810763 Ricinus communis 463  
Cucsa.086020.1 PAC:16956730 Cucumis sativus 457  
Cucsa.356870.1 PAC:16980357 Cucumis sativus 472  
Cucsa.238270.1 PAC:16970700 Cucumis sativus 498  
Cucsa.238280.1 PAC:16970701 Cucumis sativus 496  
Cucsa.238280.2 PAC:16970702 Cucumis sativus 382  
orange1.1g045846m A0A067DAW0 PAC:18120191 Citrus sinensis 469  
orange1.1g017391m A0A067G7C5 PAC:18114873 Citrus sinensis 372  
orange1.1g012476m A0A067GJM3 PAC:18114872 Citrus sinensis 462  
orange1.1g012341m A0A067E4Z1 PAC:18098393 Citrus sinensis 465  
orange1.1g012347m A0A067E4Z1 PAC:18098392 Citrus sinensis 465  
AT4G27070.1 P25269 PAC:19646872 Arabidopsis thaliana 475  
AT5G28237.1 F4K727 PAC:19669187 Arabidopsis thaliana 465  
AT5G38530.1 Q9FFW8 PAC:19665978 Arabidopsis thaliana 506  
AT5G54810.1 P14671 PAC:19669792 Arabidopsis thaliana 470  
Thhalv10025097m V4MNP2 PAC:20195977 Eutrema salsugineum 474  
Thhalv10027732m V4M4K7 PAC:20189432 Eutrema salsugineum 501  
Thhalv10013439m V4LKP1 PAC:20204952 Eutrema salsugineum 472  
Thhalv10009923m V4MUL2 PAC:20186870 Eutrema salsugineum 442  
Ciclev10011534m V4T3G5 PAC:20797029 Citrus clementina 504  
Ciclev10008204m V4TY00 PAC:20793720 Citrus clementina 465  
Ciclev10015207m V4UDS0 PAC:20816386 Citrus clementina 452  
Lus10011154 PAC:23167549 Linum usitatissimum 482  
Lus10018358 PAC:23162116 Linum usitatissimum 456  
Lus10000306 PAC:23149483 Linum usitatissimum 510  
Potri.011G136000.2 B9I0B9 PAC:27002227 Populus trichocarpa 472  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            2679363
            1366510
            2734310