Protein Domain : IPR004398

Type:  Family Name:  RNA methyltransferase, RsmD
Description:  This entry contains Ribosomal RNA small subunit methyltransferase D as well as the putative rRNA methyltransferase YlbH. They methylate the guanosine in position 966 of 16S rRNA in the assembled 30S particle []. Short Name:  RNA_MeTrfase_RsmD
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0 Child Features

1 Contains

DB identifier Type Name
IPR002052 Conserved_site DNA methylase, N-6 adenine-specific, conserved site

3 Cross Referencess

Identifier
PF03602
PIRSF004553
TIGR00095

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0008168 IPR004398
GO:0031167 IPR004398

2 Ontology Annotations

GO Term Gene Name
GO:0008168 IPR004398
GO:0031167 IPR004398

0 Parent Features

688 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
57071 D8S1R4 PAC:15423472 Selaginella moellendorffii 207  
evm.model.supercontig_14.62 PAC:16408811 Carica papaya 190  
29822.m003435 B9RUI7 PAC:16809804 Ricinus communis 268  
28069.m000037 B9TCE8 PAC:16799856 Ricinus communis 179  
Cucsa.158620.1 PAC:16965152 Cucumis sativus 313  
orange1.1g027179m A0A067GA84 PAC:18135285 Citrus sinensis 227  
orange1.1g022298m A0A067G1Z3 PAC:18135284 Citrus sinensis 299  
orange1.1g021116m A0A067GAJ9 PAC:18135283 Citrus sinensis 317  
AT3G27180.1 B3DNP3 PAC:19659012 Arabidopsis thaliana 518  
AT3G28460.1 Q9LSI8 PAC:19664267 Arabidopsis thaliana 314  
Thhalv10004634m V4KYX5 PAC:20199957 Eutrema salsugineum 314  
Ciclev10012231m V4SYZ1 PAC:20798270 Citrus clementina 317  
Ciclev10012418m V4UWZ1 PAC:20798271 Citrus clementina 280  
Lus10005835 PAC:23180242 Linum usitatissimum 330  
Lus10002756 PAC:23162062 Linum usitatissimum 1023  
Potri.001G331900.1 U5GS26 PAC:27047650 Populus trichocarpa 516  
Potri.001G349800.1 B9GHQ3 PAC:27042994 Populus trichocarpa 321  
Potri.001G349800.3 PAC:27042999 Populus trichocarpa 276  
Potri.001G349800.4 PAC:27042998 Populus trichocarpa 283  
Potri.001G349800.5 PAC:27042997 Populus trichocarpa 318  
Potri.001G349800.2 A0A2K2C8M0 PAC:27042996 Populus trichocarpa 318  
Potri.001G349800.6 A0A2K2C8M0 PAC:27042995 Populus trichocarpa 318  
Potri.017G074700.1 B9NFS3 PAC:26984808 Populus trichocarpa 62  
Gorai.001G257900.1 A0A0D2PWX5 PAC:26819788 Gossypium raimondii 326  
Gorai.001G257900.3 A0A0D2PWX5 PAC:26819789 Gossypium raimondii 326  
Gorai.001G257900.5 A0A0D2NED2 PAC:26819790 Gossypium raimondii 326  
Gorai.001G257900.2 A0A0D2QW28 PAC:26819791 Gossypium raimondii 278  
Gorai.001G257900.6 A0A0D2QW28 PAC:26819792 Gossypium raimondii 278  
Gorai.001G257900.4 A0A0D2PWX5 PAC:26819787 Gossypium raimondii 326  
18562 I0YPN9 PAC:27394855 Coccomyxa subellipsoidea C-169 226  

1 Publications

First Author Title Year Journal Volume Pages PubMed ID
            17189261