Protein Domain : IPR003194

Type:  Family Name:  Transcription initiation factor IIA, gamma subunit
Description:  Transcription factor IIA (TFIIA) is one of several factors that form part of a transcription pre-initiation complex along with RNA polymerase II, the TATA-box-binding protein (TBP) and TBP-associated factors, on the TATA-box sequence upstream of the initiation start site. After initiation, some components of the pre-initiation complex (including TFIIA) remain attached and re-initiate a subsequent round of transcription. TFIIA binds to TBP to stabilise TBP binding to the TATA element. TFIIA also inhibits the cytokine HMGB1 (high mobility group 1 protein) binding to TBP [], and can dissociate HMGB1 already bound to TBP/TATA-box.Human and Drosophila TFIIA have three subunits: two large subunits, LN/alpha and LC/beta, derived from the same gene, and a small subunit, S/gamma. Yeast TFIIA has two subunits: a large TOA1 subunit that shows sequence similarity to the N-terminal of LN/alpha and the C-terminal of LC/beta, and a small subunit, TOA2 that is highly homologous with S/gamma. The conserved regions of the large and small subunits of TFIIA combine to form two domains: a four-helix bundle (helical domain) composed of two helices from each of the N-terminal regions of TOA1 and TOA2 in yeast; and a beta-barrel (beta-barrel domain) composed of beta-sheets from the C-terminal regions of TOA1 and TOA2 [].This entry represents the gamma subunit of transcription factor TFIIA. Short Name:  TFIIA_gsu

0 Child Features

2 Contains

DB identifier Type Name
IPR015872 Domain Transcription initiation factor IIA, gamma subunit, N-terminal
IPR015871 Domain Transcription initiation factor IIA, gamma subunit, C-terminal

2 Cross Referencess

Identifier
PTHR10966
PIRSF009415

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0006367 IPR003194
GO:0005672 IPR003194

2 Ontology Annotations

GO Term Gene Name
GO:0006367 IPR003194
GO:0005672 IPR003194

0 Parent Features

633 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
233015 D8S363 PAC:15419470 Selaginella moellendorffii 108  
evm.model.supercontig_21.43 PAC:16413554 Carica papaya 106  
29596.m000709 B9SMZ0 PAC:16803405 Ricinus communis 106  
Cucsa.088430.1 A0A0A0LMF8 PAC:16957004 Cucumis sativus 106  
Cucsa.088430.2 A0A0A0LMF8 PAC:16957005 Cucumis sativus 106  
Cucsa.088430.3 A0A0A0LMF8 PAC:16957006 Cucumis sativus 106  
orange1.1g033996m A0A067GNG5 PAC:18107674 Citrus sinensis 106  
orange1.1g033999m A0A067GNG5 PAC:18107675 Citrus sinensis 106  
AT4G24440.2 Q39236 PAC:19647807 Arabidopsis thaliana 106  
AT4G24440.1 Q39236 PAC:19647806 Arabidopsis thaliana 106  
Thhalv10026638m V4MEI1 PAC:20194913 Eutrema salsugineum 106  
Thhalv10026637m V4MEI1 PAC:20194912 Eutrema salsugineum 106  
Ciclev10002917m V4T1L2 PAC:20785855 Citrus clementina 106  
Ciclev10002918m V4T1L2 PAC:20785854 Citrus clementina 106  
Lus10001864 PAC:23149325 Linum usitatissimum 106  
Potri.005G151700.1 A0A2K2AH49 PAC:27029807 Populus trichocarpa 106  
Potri.005G151700.3 PAC:27029808 Populus trichocarpa 99  
Potri.005G151700.2 A0A2K2AH49 PAC:27029806 Populus trichocarpa 106  
Gorai.009G228000.1 A0A0D2S6F3 PAC:26762232 Gossypium raimondii 106  
Gorai.009G228000.2 A0A0D2S6F3 PAC:26762233 Gossypium raimondii 106  
Gorai.009G278800.1 A0A0D2UV21 PAC:26771380 Gossypium raimondii 106  
66080 I0YZC5 PAC:27386906 Coccomyxa subellipsoidea C-169 119  
124787 C1ML87 PAC:27342667 Micromonas pusilla CCMP1545 111  
55217 PAC:27399048 Micromonas sp RCC299 112  
119620 A4RSQ2 PAC:27414833 Ostreococcus lucimarinus 113  
Thecc1EG034542t2 A0A061FEM1 PAC:27457905 Theobroma cacao 106  
Thecc1EG034542t1 A0A061FEM1 PAC:27457904 Theobroma cacao 106  
Migut.N01147.4.p A0A022RFB2 PAC:28922586 Mimulus guttatus 106  
Migut.N01147.2.p A0A022RFB2 PAC:28922587 Mimulus guttatus 106  
Migut.N01147.1.p A0A022RFB2 PAC:28922588 Mimulus guttatus 106  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            12818428
            8610010