Protein Domain : IPR004043

Type:  Domain Name:  LCCL domain
Description:  The LCCL domain has been named after the best characterised proteins that were found to contain it, namely Limulus factor C, Coch-5b2 and Lgl1. It is an about 100 amino acids domain whose C-terminal part contains a highly conserved histidine in a conserved motif YxxxSxxCxAAVHxGVI. The LCCL module is thought to be an autonomously folding domain that has been used for the construction of various modular proteins through exon-shuffling. It has been found in various metazoan proteins in association with complement B-type domains, C-type lectin domains, von Willebrand type A domains, CUB domains, discoidin lectin domains or CAP domains. It has been proposed that the LCCL domain could be involved in lipopolysaccharide (LPS) binding [, ]. Secondary structure prediction suggests that the LCCL domain contains six beta strands and two alpha helices [].Some proteins known to contain a LCCL domain include Limulus factor C, a LPS endotoxin-sensitive trypsin type serine protease which serves to protect the organism from bacterial infection; vertebrate cochlear protein cochlin or coch-5b2 (Cochlin is probably a secreted protein, mutations affecting the LCCL domain of coch-5b2 cause the deafness disorder DFNA9 in humans); and mammalian late gestation lung protein Lgl1, contains two tandem copies of the LCCL domain []. Short Name:  LCCL

0 Child Features

0 Contains

5 Cross Referencess

Identifier
PF03815
PS50820
SM00603
G3DSA:2.170.130.20
SSF69848

1 Found In

DB identifier Type Name
IPR017229 Family Multidomain scavenger receptor-like protein PxSR

0 GO Annotation

0 Ontology Annotations

0 Parent Features

738 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
438869 D8R019 PAC:15401941 Selaginella moellendorffii 531  
evm.model.supercontig_138.52 PAC:16408489 Carica papaya 384  
29983.m003300 B9RWA2 PAC:16815065 Ricinus communis 833  
Cucsa.228220.1 PAC:16970039 Cucumis sativus 348  
Cucsa.240670.1 PAC:16970921 Cucumis sativus 206  
AT5G08450.2 Q8RWV9 PAC:19665508 Arabidopsis thaliana 918  
AT5G08450.3 Q8RWV9 PAC:19665509 Arabidopsis thaliana 918  
AT5G08450.1 Q8RWV9 PAC:19665507 Arabidopsis thaliana 918  
Thhalv10012626m V4KS76 PAC:20206431 Eutrema salsugineum 899  
Thhalv10012628m V4KS76 PAC:20206432 Eutrema salsugineum 899  
Thhalv10012632m V4LAU6 PAC:20206433 Eutrema salsugineum 897  
Ciclev10024932m V4UJX6 PAC:20799441 Citrus clementina 784  
Ciclev10024915m V4RXK6 PAC:20799440 Citrus clementina 803  
Lus10004299 PAC:23163621 Linum usitatissimum 786  
Lus10019217 PAC:23141388 Linum usitatissimum 784  
Potri.T015100.2 PAC:27051384 Populus trichocarpa 641  
Potri.T015100.3 PAC:27051385 Populus trichocarpa 636  
Potri.T015100.1 PAC:27051383 Populus trichocarpa 785  
Potri.T015700.1 PAC:27051443 Populus trichocarpa 619  
Potri.T044700.1 PAC:27000327 Populus trichocarpa 824  
Potri.T044400.1 PAC:27000313 Populus trichocarpa 530  
Potri.T044400.3 A0A2K1R8R0 PAC:27000314 Populus trichocarpa 463  
Potri.004G135800.1 A0A2K2AU77 PAC:26990115 Populus trichocarpa 803  
Gorai.002G106900.1 A0A0D2QAY5 PAC:26795125 Gossypium raimondii 816  
66002 I0YYX3 PAC:27386576 Coccomyxa subellipsoidea C-169 295  
156557 PAC:27347901 Micromonas pusilla CCMP1545 316  
62427 C1EDX8 PAC:27405057 Micromonas sp RCC299 395  
105610 C1E6Q9 PAC:27395637 Micromonas sp RCC299 409  
15185 A4RWM0 PAC:27415315 Ostreococcus lucimarinus 319  
Thecc1EG031345t1 A0A061F803 PAC:27446428 Theobroma cacao 342  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            10971586
            9806553
            10362728