Protein Domain : IPR013633

Type:  Family Name:  siRNA-mediated silencing protein NRDE-2
Description:  Eukaryotic cells express a wide variety of endogenous small regulatory RNAs that regulate heterochromatin formation, developmental timing, defence against parasitic nucleic acids, and genome rearrangement. Many small regulatory RNAs are thought to function in nuclei, and in plants and fungi small interfering RNAs (siRNAs) associate with nascent transcripts and direct chromatin and/or DNA modifications. NRDE-2, is required for siRNA-mediated silencing in nuclei. NRDE-2 associates with the Argonaute protein NRDE-3 within nuclei and is recruited by NRDE-3/siRNA complexes to nascent transcripts that have been targeted by RNA interference, RNAi, the process whereby double-stranded RNA directs the sequence-specific degradation of mRNA []. Short Name:  NRDE-2

0 Child Features

0 Contains

1 Cross References

Identifier
PF08424

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

732 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
61333 D8R0D1 PAC:15415504 Selaginella moellendorffii 570  
88336 D8R9W7 PAC:15405598 Selaginella moellendorffii 1078  
evm.model.supercontig_7.123 PAC:16425024 Carica papaya 651  
29585.m000587 B9SR26 PAC:16803151 Ricinus communis 1707  
29662.m000448 B9SNW2 PAC:16805091 Ricinus communis 1139  
Cucsa.002660.1 PAC:16950938 Cucumis sativus 1756  
Cucsa.122180.1 A0A0A0LVY4 PAC:16961424 Cucumis sativus 1164  
orange1.1g000307m A0A067FK40 PAC:18095385 Citrus sinensis 1690  
orange1.1g000323m A0A067FNM0 PAC:18095387 Citrus sinensis 1669  
orange1.1g000771m A0A067FNM5 PAC:18095392 Citrus sinensis 1294  
orange1.1g000330m A0A067FWB3 PAC:18095388 Citrus sinensis 1652  
orange1.1g000768m A0A067FNM5 PAC:18095391 Citrus sinensis 1294  
orange1.1g000770m A0A067FNM5 PAC:18095390 Citrus sinensis 1294  
orange1.1g000322m A0A067FJZ1 PAC:18095386 Citrus sinensis 1670  
orange1.1g001167m A0A067DUY2 PAC:18104282 Citrus sinensis 1134  
AT3G17712.2 F4J6D7 PAC:19665241 Arabidopsis thaliana 856  
AT3G17712.1 F4J6D8 PAC:19665242 Arabidopsis thaliana 794  
AT3G17740.1 Q9LSH4 PAC:19664924 Arabidopsis thaliana 1149  
AT3G17712.3 F4J6D9 PAC:19665243 Arabidopsis thaliana 769  
Thhalv10019937m V4LCJ1 PAC:20181856 Eutrema salsugineum 1142  
Ciclev10018592m V4T332 PAC:20806852 Citrus clementina 1134  
Ciclev10030549m V4SNB5 PAC:20802784 Citrus clementina 1175  
Ciclev10030497m V4T7U1 PAC:20802783 Citrus clementina 1510  
Lus10031899 PAC:23180690 Linum usitatissimum 1191  
Potri.015G033300.1 PAC:27017912 Populus trichocarpa 1188  
Potri.015G033300.2 A0A2K1XHD6 PAC:27017913 Populus trichocarpa 1185  
Gorai.005G134900.1 A0A0D2RKY5 PAC:26803554 Gossypium raimondii 1157  
Gorai.005G134900.2 A0A0D2NC78 PAC:26803555 Gossypium raimondii 981  
40647 I0Z419 PAC:27389785 Coccomyxa subellipsoidea C-169 1196  
28863 A4RR22 PAC:27418121 Ostreococcus lucimarinus 897  

1 Publications

First Author Title Year Journal Volume Pages PubMed ID
            20543824