Gene : Thhalv10024192m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11254:SF73 - E3 UBIQUITIN-PROTEIN LIGASE TRIP12 Genomic Order:  45
Name:  ? Thhalv10024192m.g Secondary Identifier:  ? PAC:20195004
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-7511 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10024192m.g 0.5kb upstream 0.5kb upstream 8970 true scaffold_1: 160303-169272 Eutrema salsugineum
Thhalv10024192m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 160303-160802 Eutrema salsugineum
Thhalv10024192m.g 0.5kb downstream 0.5kb downstream 8970 true scaffold_1: 160803-169772 Eutrema salsugineum
Thhalv10024192m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 169273-169772 Eutrema salsugineum
Thhalv10024192m.g 1.0kb upstream 1.0kb upstream 9470 true scaffold_1: 159803-169272 Eutrema salsugineum
Thhalv10024192m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 159803-160802 Eutrema salsugineum
Thhalv10024192m.g 1.0kb downstream 1.0kb downstream 9470 true scaffold_1: 160803-170272 Eutrema salsugineum
Thhalv10024192m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 169273-170272 Eutrema salsugineum
Thhalv10024192m.g 2.0kb upstream 2.0kb upstream 10470 true scaffold_1: 158803-169272 Eutrema salsugineum
Thhalv10024192m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 158803-160802 Eutrema salsugineum
Thhalv10024192m.g 2.0kb downstream 2.0kb downstream 10470 true scaffold_1: 160803-171272 Eutrema salsugineum
Thhalv10024192m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 169273-171272 Eutrema salsugineum
Thhalv10024192m.g 5.0kb upstream 5.0kb upstream 13470 true scaffold_1: 155803-169272 Eutrema salsugineum
Thhalv10024192m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 155803-160802 Eutrema salsugineum
Thhalv10024192m.g 5.0kb downstream 5.0kb downstream 13470 true scaffold_1: 160803-174272 Eutrema salsugineum
Thhalv10024192m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 169273-174272 Eutrema salsugineum
Thhalv10024192m.g 10.0kb upstream 10.0kb upstream 18470 true scaffold_1: 150803-169272 Eutrema salsugineum
Thhalv10024192m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 150803-160802 Eutrema salsugineum
Thhalv10024192m.g 10.0kb downstream 10.0kb downstream 18470 true scaffold_1: 160803-179272 Eutrema salsugineum
Thhalv10024192m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 169273-179272 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374695 5261 Brassicaceae View MSA
123839219 5264 Brassicales-Malvales View MSA
124342821 5266 SBM View MSA
124237502 5268 Malvidae View MSA
124064467 5270 Rosid View MSA
123740088 5271 Pentapetalae View MSA
122794553 5272 Eudicot View MSA
122042659 5273 Angiosperm View MSA
121345958 5274 Embryophyte View MSA
123428406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain