Gene : Thhalv10024450m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11946:SF86 - METHIONINE--TRNA LIGASE, CYTOPLASMIC Genomic Order:  2896
Name:  ? Thhalv10024450m.g Secondary Identifier:  ? PAC:20195404
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum TRNA-CHARGING-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10024450m.g 0.5kb upstream 0.5kb upstream 6575 true scaffold_1: 15743703-15750277 Eutrema salsugineum
Thhalv10024450m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 15743703-15744202 Eutrema salsugineum
Thhalv10024450m.g 0.5kb downstream 0.5kb downstream 6575 true scaffold_1: 15744203-15750777 Eutrema salsugineum
Thhalv10024450m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 15750278-15750777 Eutrema salsugineum
Thhalv10024450m.g 1.0kb upstream 1.0kb upstream 7075 true scaffold_1: 15743203-15750277 Eutrema salsugineum
Thhalv10024450m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 15743203-15744202 Eutrema salsugineum
Thhalv10024450m.g 1.0kb downstream 1.0kb downstream 7075 true scaffold_1: 15744203-15751277 Eutrema salsugineum
Thhalv10024450m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 15750278-15751277 Eutrema salsugineum
Thhalv10024450m.g 2.0kb upstream 2.0kb upstream 8075 true scaffold_1: 15742203-15750277 Eutrema salsugineum
Thhalv10024450m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 15742203-15744202 Eutrema salsugineum
Thhalv10024450m.g 2.0kb downstream 2.0kb downstream 8075 true scaffold_1: 15744203-15752277 Eutrema salsugineum
Thhalv10024450m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 15750278-15752277 Eutrema salsugineum
Thhalv10024450m.g 5.0kb upstream 5.0kb upstream 11075 true scaffold_1: 15739203-15750277 Eutrema salsugineum
Thhalv10024450m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 15739203-15744202 Eutrema salsugineum
Thhalv10024450m.g 5.0kb downstream 5.0kb downstream 11075 true scaffold_1: 15744203-15755277 Eutrema salsugineum
Thhalv10024450m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 15750278-15755277 Eutrema salsugineum
Thhalv10024450m.g 10.0kb upstream 10.0kb upstream 16075 true scaffold_1: 15734203-15750277 Eutrema salsugineum
Thhalv10024450m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 15734203-15744202 Eutrema salsugineum
Thhalv10024450m.g 10.0kb downstream 10.0kb downstream 16075 true scaffold_1: 15744203-15760277 Eutrema salsugineum
Thhalv10024450m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 15750278-15760277 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367230 5261 Brassicaceae View MSA
123828718 5264 Brassicales-Malvales View MSA
124338406 5266 SBM View MSA
124247313 5268 Malvidae View MSA
124066402 5270 Rosid View MSA
123739463 5271 Pentapetalae View MSA
122793532 5272 Eudicot View MSA
122041539 5273 Angiosperm View MSA
121348816 5274 Embryophyte View MSA
123428788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain