Gene : Thhalv10024482m.g E. salsugineum v1.0
Defline:  (1 of 3) PTHR22808 - NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING Genomic Order:  176
Name:  ? Thhalv10024482m.g Secondary Identifier:  ? PAC:20195914
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-6829 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10024482m.g 0.5kb upstream 0.5kb upstream 4031 true scaffold_1: 697326-701356 Eutrema salsugineum
Thhalv10024482m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 700857-701356 Eutrema salsugineum
Thhalv10024482m.g 0.5kb downstream 0.5kb downstream 4031 true scaffold_1: 696826-700856 Eutrema salsugineum
Thhalv10024482m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 696826-697325 Eutrema salsugineum
Thhalv10024482m.g 1.0kb upstream 1.0kb upstream 4531 true scaffold_1: 697326-701856 Eutrema salsugineum
Thhalv10024482m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 700857-701856 Eutrema salsugineum
Thhalv10024482m.g 1.0kb downstream 1.0kb downstream 4531 true scaffold_1: 696326-700856 Eutrema salsugineum
Thhalv10024482m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 696326-697325 Eutrema salsugineum
Thhalv10024482m.g 2.0kb upstream 2.0kb upstream 5531 true scaffold_1: 697326-702856 Eutrema salsugineum
Thhalv10024482m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 700857-702856 Eutrema salsugineum
Thhalv10024482m.g 2.0kb downstream 2.0kb downstream 5531 true scaffold_1: 695326-700856 Eutrema salsugineum
Thhalv10024482m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 695326-697325 Eutrema salsugineum
Thhalv10024482m.g 5.0kb upstream 5.0kb upstream 8531 true scaffold_1: 697326-705856 Eutrema salsugineum
Thhalv10024482m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 700857-705856 Eutrema salsugineum
Thhalv10024482m.g 5.0kb downstream 5.0kb downstream 8531 true scaffold_1: 692326-700856 Eutrema salsugineum
Thhalv10024482m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 692326-697325 Eutrema salsugineum
Thhalv10024482m.g 10.0kb upstream 10.0kb upstream 13531 true scaffold_1: 697326-710856 Eutrema salsugineum
Thhalv10024482m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 700857-710856 Eutrema salsugineum
Thhalv10024482m.g 10.0kb downstream 10.0kb downstream 13531 true scaffold_1: 687326-700856 Eutrema salsugineum
Thhalv10024482m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 687326-697325 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368529 5261 Brassicaceae View MSA
123799592 5264 Brassicales-Malvales View MSA
124297094 5266 SBM View MSA
124251065 5268 Malvidae View MSA
123952562 5270 Rosid View MSA
123530294 5271 Pentapetalae View MSA
122565260 5272 Eudicot View MSA
122043899 5273 Angiosperm View MSA
121349940 5274 Embryophyte View MSA
123426394 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain