Gene : Thhalv10024478m.g E. salsugineum v1.0
Defline:  (1 of 2) 6.2.1.20 - Long-chain-fatty-acid--[acyl-carrier-protein] ligase / Acyl-[acyl-carrier-protein] synthetase Genomic Order:  2858
Name:  ? Thhalv10024478m.g Secondary Identifier:  ? PAC:20196045
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-6622 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10024478m.g 0.5kb upstream 0.5kb upstream 6182 true scaffold_1: 15171998-15178179 Eutrema salsugineum
Thhalv10024478m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 15171998-15172497 Eutrema salsugineum
Thhalv10024478m.g 0.5kb downstream 0.5kb downstream 6182 true scaffold_1: 15172498-15178679 Eutrema salsugineum
Thhalv10024478m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 15178180-15178679 Eutrema salsugineum
Thhalv10024478m.g 1.0kb upstream 1.0kb upstream 6682 true scaffold_1: 15171498-15178179 Eutrema salsugineum
Thhalv10024478m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 15171498-15172497 Eutrema salsugineum
Thhalv10024478m.g 1.0kb downstream 1.0kb downstream 6682 true scaffold_1: 15172498-15179179 Eutrema salsugineum
Thhalv10024478m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 15178180-15179179 Eutrema salsugineum
Thhalv10024478m.g 2.0kb upstream 2.0kb upstream 7682 true scaffold_1: 15170498-15178179 Eutrema salsugineum
Thhalv10024478m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 15170498-15172497 Eutrema salsugineum
Thhalv10024478m.g 2.0kb downstream 2.0kb downstream 7682 true scaffold_1: 15172498-15180179 Eutrema salsugineum
Thhalv10024478m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 15178180-15180179 Eutrema salsugineum
Thhalv10024478m.g 5.0kb upstream 5.0kb upstream 10682 true scaffold_1: 15167498-15178179 Eutrema salsugineum
Thhalv10024478m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 15167498-15172497 Eutrema salsugineum
Thhalv10024478m.g 5.0kb downstream 5.0kb downstream 10682 true scaffold_1: 15172498-15183179 Eutrema salsugineum
Thhalv10024478m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 15178180-15183179 Eutrema salsugineum
Thhalv10024478m.g 10.0kb upstream 10.0kb upstream 15682 true scaffold_1: 15162498-15178179 Eutrema salsugineum
Thhalv10024478m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 15162498-15172497 Eutrema salsugineum
Thhalv10024478m.g 10.0kb downstream 10.0kb downstream 15682 true scaffold_1: 15172498-15188179 Eutrema salsugineum
Thhalv10024478m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 15178180-15188179 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372411 5261 Brassicaceae View MSA
123800358 5264 Brassicales-Malvales View MSA
124297775 5266 SBM View MSA
124149578 5268 Malvidae View MSA
124063017 5270 Rosid View MSA
123740730 5271 Pentapetalae View MSA
122788844 5272 Eudicot View MSA
122041588 5273 Angiosperm View MSA
121344484 5274 Embryophyte View MSA
123427454 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain