Gene : Thhalv10024297m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR12526:SF304 - STARCH SYNTHASE 4, CHLOROPLASTIC/AMYLOPLASTIC-RELATED Genomic Order:  2216
Name:  ? Thhalv10024297m.g Secondary Identifier:  ? PAC:20193272
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum GLYCOGENSYNTH-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-622 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10024297m.g 0.5kb upstream 0.5kb upstream 5385 true scaffold_1: 9569135-9574519 Eutrema salsugineum
Thhalv10024297m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 9574020-9574519 Eutrema salsugineum
Thhalv10024297m.g 0.5kb downstream 0.5kb downstream 5385 true scaffold_1: 9568635-9574019 Eutrema salsugineum
Thhalv10024297m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 9568635-9569134 Eutrema salsugineum
Thhalv10024297m.g 1.0kb upstream 1.0kb upstream 5885 true scaffold_1: 9569135-9575019 Eutrema salsugineum
Thhalv10024297m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 9574020-9575019 Eutrema salsugineum
Thhalv10024297m.g 1.0kb downstream 1.0kb downstream 5885 true scaffold_1: 9568135-9574019 Eutrema salsugineum
Thhalv10024297m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 9568135-9569134 Eutrema salsugineum
Thhalv10024297m.g 2.0kb upstream 2.0kb upstream 6885 true scaffold_1: 9569135-9576019 Eutrema salsugineum
Thhalv10024297m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 9574020-9576019 Eutrema salsugineum
Thhalv10024297m.g 2.0kb downstream 2.0kb downstream 6885 true scaffold_1: 9567135-9574019 Eutrema salsugineum
Thhalv10024297m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 9567135-9569134 Eutrema salsugineum
Thhalv10024297m.g 5.0kb upstream 5.0kb upstream 9885 true scaffold_1: 9569135-9579019 Eutrema salsugineum
Thhalv10024297m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 9574020-9579019 Eutrema salsugineum
Thhalv10024297m.g 5.0kb downstream 5.0kb downstream 9885 true scaffold_1: 9564135-9574019 Eutrema salsugineum
Thhalv10024297m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 9564135-9569134 Eutrema salsugineum
Thhalv10024297m.g 10.0kb upstream 10.0kb upstream 14885 true scaffold_1: 9569135-9584019 Eutrema salsugineum
Thhalv10024297m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 9574020-9584019 Eutrema salsugineum
Thhalv10024297m.g 10.0kb downstream 10.0kb downstream 14885 true scaffold_1: 9559135-9574019 Eutrema salsugineum
Thhalv10024297m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 9559135-9569134 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360271 5261 Brassicaceae View MSA
123829886 5264 Brassicales-Malvales View MSA
124343403 5266 SBM View MSA
124243663 5268 Malvidae View MSA
124062542 5270 Rosid View MSA
123737586 5271 Pentapetalae View MSA
122786746 5272 Eudicot View MSA
122042885 5273 Angiosperm View MSA
121344527 5274 Embryophyte View MSA
123428648 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain