Gene : Thhalv10024364m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR13763:SF1 - PROTEIN BREAST CANCER SUSCEPTIBILITY 1 HOMOLOG Genomic Order:  1939
Name:  ? Thhalv10024364m.g Secondary Identifier:  ? PAC:20195494
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-7511 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10024364m.g 0.5kb upstream 0.5kb upstream 4989 true scaffold_1: 8246003-8250991 Eutrema salsugineum
Thhalv10024364m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8250492-8250991 Eutrema salsugineum
Thhalv10024364m.g 0.5kb downstream 0.5kb downstream 4989 true scaffold_1: 8245503-8250491 Eutrema salsugineum
Thhalv10024364m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8245503-8246002 Eutrema salsugineum
Thhalv10024364m.g 1.0kb upstream 1.0kb upstream 5489 true scaffold_1: 8246003-8251491 Eutrema salsugineum
Thhalv10024364m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8250492-8251491 Eutrema salsugineum
Thhalv10024364m.g 1.0kb downstream 1.0kb downstream 5489 true scaffold_1: 8245003-8250491 Eutrema salsugineum
Thhalv10024364m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8245003-8246002 Eutrema salsugineum
Thhalv10024364m.g 2.0kb upstream 2.0kb upstream 6489 true scaffold_1: 8246003-8252491 Eutrema salsugineum
Thhalv10024364m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8250492-8252491 Eutrema salsugineum
Thhalv10024364m.g 2.0kb downstream 2.0kb downstream 6489 true scaffold_1: 8244003-8250491 Eutrema salsugineum
Thhalv10024364m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8244003-8246002 Eutrema salsugineum
Thhalv10024364m.g 5.0kb upstream 5.0kb upstream 9489 true scaffold_1: 8246003-8255491 Eutrema salsugineum
Thhalv10024364m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8250492-8255491 Eutrema salsugineum
Thhalv10024364m.g 5.0kb downstream 5.0kb downstream 9489 true scaffold_1: 8241003-8250491 Eutrema salsugineum
Thhalv10024364m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8241003-8246002 Eutrema salsugineum
Thhalv10024364m.g 10.0kb upstream 10.0kb upstream 14489 true scaffold_1: 8246003-8260491 Eutrema salsugineum
Thhalv10024364m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8250492-8260491 Eutrema salsugineum
Thhalv10024364m.g 10.0kb downstream 10.0kb downstream 14489 true scaffold_1: 8236003-8250491 Eutrema salsugineum
Thhalv10024364m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8236003-8246002 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374369 5261 Brassicaceae View MSA
123828360 5264 Brassicales-Malvales View MSA
124321529 5266 SBM View MSA
124252293 5268 Malvidae View MSA
124069553 5270 Rosid View MSA
123745741 5271 Pentapetalae View MSA
122790490 5272 Eudicot View MSA
122049651 5273 Angiosperm View MSA
121346797 5274 Embryophyte View MSA
123380447 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain