Gene : Thhalv10024358m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11670:SF40 - ACONITATE HYDRATASE 1 Genomic Order:  408
Name:  ? Thhalv10024358m.g Secondary Identifier:  ? PAC:20193169
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum GLYOXYLATE-BYPASS Eutrema salsugineum pathologic  
Esalsugineum PWY-5464 Eutrema salsugineum pathologic  
Esalsugineum PWY-561 Eutrema salsugineum pathologic  
Esalsugineum PWY-5690 Eutrema salsugineum pathologic  
Esalsugineum PWY-6549 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10024358m.g 0.5kb upstream 0.5kb upstream 5910 true scaffold_1: 1783064-1788973 Eutrema salsugineum
Thhalv10024358m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1783064-1783563 Eutrema salsugineum
Thhalv10024358m.g 0.5kb downstream 0.5kb downstream 5910 true scaffold_1: 1783564-1789473 Eutrema salsugineum
Thhalv10024358m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1788974-1789473 Eutrema salsugineum
Thhalv10024358m.g 1.0kb upstream 1.0kb upstream 6410 true scaffold_1: 1782564-1788973 Eutrema salsugineum
Thhalv10024358m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1782564-1783563 Eutrema salsugineum
Thhalv10024358m.g 1.0kb downstream 1.0kb downstream 6410 true scaffold_1: 1783564-1789973 Eutrema salsugineum
Thhalv10024358m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1788974-1789973 Eutrema salsugineum
Thhalv10024358m.g 2.0kb upstream 2.0kb upstream 7410 true scaffold_1: 1781564-1788973 Eutrema salsugineum
Thhalv10024358m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1781564-1783563 Eutrema salsugineum
Thhalv10024358m.g 2.0kb downstream 2.0kb downstream 7410 true scaffold_1: 1783564-1790973 Eutrema salsugineum
Thhalv10024358m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1788974-1790973 Eutrema salsugineum
Thhalv10024358m.g 5.0kb upstream 5.0kb upstream 10410 true scaffold_1: 1778564-1788973 Eutrema salsugineum
Thhalv10024358m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1778564-1783563 Eutrema salsugineum
Thhalv10024358m.g 5.0kb downstream 5.0kb downstream 10410 true scaffold_1: 1783564-1793973 Eutrema salsugineum
Thhalv10024358m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1788974-1793973 Eutrema salsugineum
Thhalv10024358m.g 10.0kb upstream 10.0kb upstream 15410 true scaffold_1: 1773564-1788973 Eutrema salsugineum
Thhalv10024358m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1773564-1783563 Eutrema salsugineum
Thhalv10024358m.g 10.0kb downstream 10.0kb downstream 15410 true scaffold_1: 1783564-1798973 Eutrema salsugineum
Thhalv10024358m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1788974-1798973 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379394 5261 Brassicaceae View MSA
123836959 5264 Brassicales-Malvales View MSA
124346925 5266 SBM View MSA
124245948 5268 Malvidae View MSA
124069604 5270 Rosid View MSA
123752886 5271 Pentapetalae View MSA
122795491 5272 Eudicot View MSA
122043810 5273 Angiosperm View MSA
121344247 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain