Gene : Thhalv10024715m.g E. salsugineum v1.0
Defline:  (1 of 5) 1.1.1.95 - Phosphoglycerate dehydrogenase / Phosphoglyceric acid dehydrogenase Genomic Order:  581
Name:  ? Thhalv10024715m.g Secondary Identifier:  ? PAC:20194022
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum SER-GLYSYN-PWY Eutrema salsugineum pathologic  
Esalsugineum SERSYN-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10024715m.g 0.5kb upstream 0.5kb upstream 3258 true scaffold_1: 2481727-2484984 Eutrema salsugineum
Thhalv10024715m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2481727-2482226 Eutrema salsugineum
Thhalv10024715m.g 0.5kb downstream 0.5kb downstream 3258 true scaffold_1: 2482227-2485484 Eutrema salsugineum
Thhalv10024715m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2484985-2485484 Eutrema salsugineum
Thhalv10024715m.g 1.0kb upstream 1.0kb upstream 3758 true scaffold_1: 2481227-2484984 Eutrema salsugineum
Thhalv10024715m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2481227-2482226 Eutrema salsugineum
Thhalv10024715m.g 1.0kb downstream 1.0kb downstream 3758 true scaffold_1: 2482227-2485984 Eutrema salsugineum
Thhalv10024715m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2484985-2485984 Eutrema salsugineum
Thhalv10024715m.g 2.0kb upstream 2.0kb upstream 4758 true scaffold_1: 2480227-2484984 Eutrema salsugineum
Thhalv10024715m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2480227-2482226 Eutrema salsugineum
Thhalv10024715m.g 2.0kb downstream 2.0kb downstream 4758 true scaffold_1: 2482227-2486984 Eutrema salsugineum
Thhalv10024715m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2484985-2486984 Eutrema salsugineum
Thhalv10024715m.g 5.0kb upstream 5.0kb upstream 7758 true scaffold_1: 2477227-2484984 Eutrema salsugineum
Thhalv10024715m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2477227-2482226 Eutrema salsugineum
Thhalv10024715m.g 5.0kb downstream 5.0kb downstream 7758 true scaffold_1: 2482227-2489984 Eutrema salsugineum
Thhalv10024715m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2484985-2489984 Eutrema salsugineum
Thhalv10024715m.g 10.0kb upstream 10.0kb upstream 12758 true scaffold_1: 2472227-2484984 Eutrema salsugineum
Thhalv10024715m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2472227-2482226 Eutrema salsugineum
Thhalv10024715m.g 10.0kb downstream 10.0kb downstream 12758 true scaffold_1: 2482227-2494984 Eutrema salsugineum
Thhalv10024715m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2484985-2494984 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377940 5261 Brassicaceae View MSA
123828170 5264 Brassicales-Malvales View MSA
124344584 5266 SBM View MSA
124245424 5268 Malvidae View MSA
124071894 5270 Rosid View MSA
123750282 5271 Pentapetalae View MSA
122795023 5272 Eudicot View MSA
122044765 5273 Angiosperm View MSA
121347094 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain