Gene : Thhalv10024869m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR21266:SF25 - PROTOCHLOROPHYLLIDE-DEPENDENT TRANSLOCON COMPONENT 52, CHLOROPLASTIC Genomic Order:  1470
Name:  ? Thhalv10024869m.g Secondary Identifier:  ? PAC:20194144
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5098 Eutrema salsugineum pathologic  
Esalsugineum PWY-6927 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10024869m.g 0.5kb upstream 0.5kb upstream 2899 true scaffold_1: 6128511-6131409 Eutrema salsugineum
Thhalv10024869m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6128511-6129010 Eutrema salsugineum
Thhalv10024869m.g 0.5kb downstream 0.5kb downstream 2899 true scaffold_1: 6129011-6131909 Eutrema salsugineum
Thhalv10024869m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6131410-6131909 Eutrema salsugineum
Thhalv10024869m.g 1.0kb upstream 1.0kb upstream 3399 true scaffold_1: 6128011-6131409 Eutrema salsugineum
Thhalv10024869m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6128011-6129010 Eutrema salsugineum
Thhalv10024869m.g 1.0kb downstream 1.0kb downstream 3399 true scaffold_1: 6129011-6132409 Eutrema salsugineum
Thhalv10024869m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6131410-6132409 Eutrema salsugineum
Thhalv10024869m.g 2.0kb upstream 2.0kb upstream 4399 true scaffold_1: 6127011-6131409 Eutrema salsugineum
Thhalv10024869m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6127011-6129010 Eutrema salsugineum
Thhalv10024869m.g 2.0kb downstream 2.0kb downstream 4399 true scaffold_1: 6129011-6133409 Eutrema salsugineum
Thhalv10024869m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6131410-6133409 Eutrema salsugineum
Thhalv10024869m.g 5.0kb upstream 5.0kb upstream 7399 true scaffold_1: 6124011-6131409 Eutrema salsugineum
Thhalv10024869m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6124011-6129010 Eutrema salsugineum
Thhalv10024869m.g 5.0kb downstream 5.0kb downstream 7399 true scaffold_1: 6129011-6136409 Eutrema salsugineum
Thhalv10024869m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6131410-6136409 Eutrema salsugineum
Thhalv10024869m.g 10.0kb upstream 10.0kb upstream 12399 true scaffold_1: 6119011-6131409 Eutrema salsugineum
Thhalv10024869m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6119011-6129010 Eutrema salsugineum
Thhalv10024869m.g 10.0kb downstream 10.0kb downstream 12399 true scaffold_1: 6129011-6141409 Eutrema salsugineum
Thhalv10024869m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6131410-6141409 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370768 5261 Brassicaceae View MSA
123828575 5264 Brassicales-Malvales View MSA
124336609 5266 SBM View MSA
124240236 5268 Malvidae View MSA
124064980 5270 Rosid View MSA
123746425 5271 Pentapetalae View MSA
122797838 5272 Eudicot View MSA
122045189 5273 Angiosperm View MSA
123429167 5275 Viridiplantae View MSA
121347962 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain