Gene : Thhalv10024572m.g E. salsugineum v1.0
Defline:  (1 of 1) PF02184//PF13371 - HAT (Half-A-TPR) repeat (HAT) // Tetratricopeptide repeat (TPR_9) Genomic Order:  1890
Name:  ? Thhalv10024572m.g Secondary Identifier:  ? PAC:20193921
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10024572m.g 0.5kb upstream 0.5kb upstream 3403 true scaffold_1: 8012284-8015686 Eutrema salsugineum
Thhalv10024572m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8015187-8015686 Eutrema salsugineum
Thhalv10024572m.g 0.5kb downstream 0.5kb downstream 3403 true scaffold_1: 8011784-8015186 Eutrema salsugineum
Thhalv10024572m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8011784-8012283 Eutrema salsugineum
Thhalv10024572m.g 1.0kb upstream 1.0kb upstream 3903 true scaffold_1: 8012284-8016186 Eutrema salsugineum
Thhalv10024572m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8015187-8016186 Eutrema salsugineum
Thhalv10024572m.g 1.0kb downstream 1.0kb downstream 3903 true scaffold_1: 8011284-8015186 Eutrema salsugineum
Thhalv10024572m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8011284-8012283 Eutrema salsugineum
Thhalv10024572m.g 2.0kb upstream 2.0kb upstream 4903 true scaffold_1: 8012284-8017186 Eutrema salsugineum
Thhalv10024572m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8015187-8017186 Eutrema salsugineum
Thhalv10024572m.g 2.0kb downstream 2.0kb downstream 4903 true scaffold_1: 8010284-8015186 Eutrema salsugineum
Thhalv10024572m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8010284-8012283 Eutrema salsugineum
Thhalv10024572m.g 5.0kb upstream 5.0kb upstream 7903 true scaffold_1: 8012284-8020186 Eutrema salsugineum
Thhalv10024572m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8015187-8020186 Eutrema salsugineum
Thhalv10024572m.g 5.0kb downstream 5.0kb downstream 7903 true scaffold_1: 8007284-8015186 Eutrema salsugineum
Thhalv10024572m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8007284-8012283 Eutrema salsugineum
Thhalv10024572m.g 10.0kb upstream 10.0kb upstream 12903 true scaffold_1: 8012284-8025186 Eutrema salsugineum
Thhalv10024572m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8015187-8025186 Eutrema salsugineum
Thhalv10024572m.g 10.0kb downstream 10.0kb downstream 12903 true scaffold_1: 8002284-8015186 Eutrema salsugineum
Thhalv10024572m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8002284-8012283 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122356499 5261 Brassicaceae Singleton cluster - no MSA
123794612 5264 Brassicales-Malvales Singleton cluster - no MSA
124292412 5266 SBM Singleton cluster - no MSA
124145189 5268 Malvidae Singleton cluster - no MSA
124066520 5270 Rosid View MSA
123747782 5271 Pentapetalae View MSA
122796524 5272 Eudicot View MSA
122043261 5273 Angiosperm View MSA
121344122 5274 Embryophyte View MSA
123426639 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain