Gene : Thhalv10024678m.g E. salsugineum v1.0

Defline:  (1 of 13) PF00560//PF07714//PF08263 - Leucine Rich Repeat (LRR_1) // Protein tyrosine kinase (Pkinase_Tyr) // Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  945
Name:  ? Thhalv10024678m.g Secondary Identifier:  ? PAC:20192906

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10024678m.g 0.5kb upstream 0.5kb upstream 3884 true scaffold_1: 3970426-3974309 Eutrema salsugineum
Thhalv10024678m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3970426-3970925 Eutrema salsugineum
Thhalv10024678m.g 0.5kb downstream 0.5kb downstream 3884 true scaffold_1: 3970926-3974809 Eutrema salsugineum
Thhalv10024678m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3974310-3974809 Eutrema salsugineum
Thhalv10024678m.g 1.0kb upstream 1.0kb upstream 4384 true scaffold_1: 3969926-3974309 Eutrema salsugineum
Thhalv10024678m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3969926-3970925 Eutrema salsugineum
Thhalv10024678m.g 1.0kb downstream 1.0kb downstream 4384 true scaffold_1: 3970926-3975309 Eutrema salsugineum
Thhalv10024678m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3974310-3975309 Eutrema salsugineum
Thhalv10024678m.g 2.0kb upstream 2.0kb upstream 5384 true scaffold_1: 3968926-3974309 Eutrema salsugineum
Thhalv10024678m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3968926-3970925 Eutrema salsugineum
Thhalv10024678m.g 2.0kb downstream 2.0kb downstream 5384 true scaffold_1: 3970926-3976309 Eutrema salsugineum
Thhalv10024678m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3974310-3976309 Eutrema salsugineum
Thhalv10024678m.g 5.0kb upstream 5.0kb upstream 8384 true scaffold_1: 3965926-3974309 Eutrema salsugineum
Thhalv10024678m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3965926-3970925 Eutrema salsugineum
Thhalv10024678m.g 5.0kb downstream 5.0kb downstream 8384 true scaffold_1: 3970926-3979309 Eutrema salsugineum
Thhalv10024678m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3974310-3979309 Eutrema salsugineum
Thhalv10024678m.g 10.0kb upstream 10.0kb upstream 13384 true scaffold_1: 3960926-3974309 Eutrema salsugineum
Thhalv10024678m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3960926-3970925 Eutrema salsugineum
Thhalv10024678m.g 10.0kb downstream 10.0kb downstream 13384 true scaffold_1: 3970926-3984309 Eutrema salsugineum
Thhalv10024678m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3974310-3984309 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361260 5261 Brassicaceae View MSA
123837545 5264 Brassicales-Malvales View MSA
124339832 5266 SBM View MSA
124242752 5268 Malvidae View MSA
124063050 5270 Rosid View MSA
123736921 5271 Pentapetalae View MSA
122790705 5272 Eudicot View MSA
122048314 5273 Angiosperm View MSA
121310927 5274 Embryophyte View MSA
123348299 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain