Gene : Thhalv10025259m.g E. salsugineum v1.0
Defline:  (1 of 2) 2.6.1.52 - Phosphoserine transaminase / PSAT Genomic Order:  431
Name:  ? Thhalv10025259m.g Secondary Identifier:  ? PAC:20194630
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum SER-GLYSYN-PWY Eutrema salsugineum pathologic  
Esalsugineum SERSYN-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10025259m.g 0.5kb upstream 0.5kb upstream 2188 true scaffold_1: 1856591-1858778 Eutrema salsugineum
Thhalv10025259m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1858279-1858778 Eutrema salsugineum
Thhalv10025259m.g 0.5kb downstream 0.5kb downstream 2188 true scaffold_1: 1856091-1858278 Eutrema salsugineum
Thhalv10025259m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1856091-1856590 Eutrema salsugineum
Thhalv10025259m.g 1.0kb upstream 1.0kb upstream 2688 true scaffold_1: 1856591-1859278 Eutrema salsugineum
Thhalv10025259m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1858279-1859278 Eutrema salsugineum
Thhalv10025259m.g 1.0kb downstream 1.0kb downstream 2688 true scaffold_1: 1855591-1858278 Eutrema salsugineum
Thhalv10025259m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1855591-1856590 Eutrema salsugineum
Thhalv10025259m.g 2.0kb upstream 2.0kb upstream 3688 true scaffold_1: 1856591-1860278 Eutrema salsugineum
Thhalv10025259m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1858279-1860278 Eutrema salsugineum
Thhalv10025259m.g 2.0kb downstream 2.0kb downstream 3688 true scaffold_1: 1854591-1858278 Eutrema salsugineum
Thhalv10025259m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1854591-1856590 Eutrema salsugineum
Thhalv10025259m.g 5.0kb upstream 5.0kb upstream 6688 true scaffold_1: 1856591-1863278 Eutrema salsugineum
Thhalv10025259m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1858279-1863278 Eutrema salsugineum
Thhalv10025259m.g 5.0kb downstream 5.0kb downstream 6688 true scaffold_1: 1851591-1858278 Eutrema salsugineum
Thhalv10025259m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1851591-1856590 Eutrema salsugineum
Thhalv10025259m.g 10.0kb upstream 10.0kb upstream 11688 true scaffold_1: 1856591-1868278 Eutrema salsugineum
Thhalv10025259m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1858279-1868278 Eutrema salsugineum
Thhalv10025259m.g 10.0kb downstream 10.0kb downstream 11688 true scaffold_1: 1846591-1858278 Eutrema salsugineum
Thhalv10025259m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1846591-1856590 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372397 5261 Brassicaceae View MSA
123837676 5264 Brassicales-Malvales View MSA
124340133 5266 SBM View MSA
124237926 5268 Malvidae View MSA
124074701 5270 Rosid View MSA
123739926 5271 Pentapetalae View MSA
122788097 5272 Eudicot View MSA
122043165 5273 Angiosperm View MSA
121346366 5274 Embryophyte View MSA
123424895 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain