Gene : Thhalv10024960m.g E. salsugineum v1.0
Defline:  (1 of 3) 4.2.1.33 - 3-isopropylmalate dehydratase / Isopropylmalate isomerase Genomic Order:  2946
Name:  ? Thhalv10024960m.g Secondary Identifier:  ? PAC:20195691
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum BRANCHED-CHAIN-AA-SYN-PWY Eutrema salsugineum pathologic  
Esalsugineum LEUSYN-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10024960m.g 0.5kb upstream 0.5kb upstream 5133 true scaffold_1: 17211112-17216244 Eutrema salsugineum
Thhalv10024960m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 17211112-17211611 Eutrema salsugineum
Thhalv10024960m.g 0.5kb downstream 0.5kb downstream 5133 true scaffold_1: 17211612-17216744 Eutrema salsugineum
Thhalv10024960m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 17216245-17216744 Eutrema salsugineum
Thhalv10024960m.g 1.0kb upstream 1.0kb upstream 5633 true scaffold_1: 17210612-17216244 Eutrema salsugineum
Thhalv10024960m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 17210612-17211611 Eutrema salsugineum
Thhalv10024960m.g 1.0kb downstream 1.0kb downstream 5633 true scaffold_1: 17211612-17217244 Eutrema salsugineum
Thhalv10024960m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 17216245-17217244 Eutrema salsugineum
Thhalv10024960m.g 2.0kb upstream 2.0kb upstream 6633 true scaffold_1: 17209612-17216244 Eutrema salsugineum
Thhalv10024960m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 17209612-17211611 Eutrema salsugineum
Thhalv10024960m.g 2.0kb downstream 2.0kb downstream 6633 true scaffold_1: 17211612-17218244 Eutrema salsugineum
Thhalv10024960m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 17216245-17218244 Eutrema salsugineum
Thhalv10024960m.g 5.0kb upstream 5.0kb upstream 9633 true scaffold_1: 17206612-17216244 Eutrema salsugineum
Thhalv10024960m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 17206612-17211611 Eutrema salsugineum
Thhalv10024960m.g 5.0kb downstream 5.0kb downstream 9633 true scaffold_1: 17211612-17221244 Eutrema salsugineum
Thhalv10024960m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 17216245-17221244 Eutrema salsugineum
Thhalv10024960m.g 10.0kb upstream 10.0kb upstream 14633 true scaffold_1: 17201612-17216244 Eutrema salsugineum
Thhalv10024960m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 17201612-17211611 Eutrema salsugineum
Thhalv10024960m.g 10.0kb downstream 10.0kb downstream 14633 true scaffold_1: 17211612-17226244 Eutrema salsugineum
Thhalv10024960m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 17216245-17226244 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376626 5261 Brassicaceae View MSA
123838353 5264 Brassicales-Malvales View MSA
124346473 5266 SBM View MSA
124238803 5268 Malvidae View MSA
124064281 5270 Rosid View MSA
123737905 5271 Pentapetalae View MSA
122792861 5272 Eudicot View MSA
122047334 5273 Angiosperm View MSA
121347218 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain