Gene : Thhalv10025046m.g E. salsugineum v1.0
Defline:  (1 of 2) 2.7.1.91 - Sphinganine kinase / Dihydrosphingosine kinase Genomic Order:  1891
Name:  ? Thhalv10025046m.g Secondary Identifier:  ? PAC:20192921
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5129 Eutrema salsugineum pathologic  
Esalsugineum PWY-6483 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10025046m.g 0.5kb upstream 0.5kb upstream 2978 true scaffold_1: 8015586-8018563 Eutrema salsugineum
Thhalv10025046m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8018064-8018563 Eutrema salsugineum
Thhalv10025046m.g 0.5kb downstream 0.5kb downstream 2978 true scaffold_1: 8015086-8018063 Eutrema salsugineum
Thhalv10025046m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8015086-8015585 Eutrema salsugineum
Thhalv10025046m.g 1.0kb upstream 1.0kb upstream 3478 true scaffold_1: 8015586-8019063 Eutrema salsugineum
Thhalv10025046m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8018064-8019063 Eutrema salsugineum
Thhalv10025046m.g 1.0kb downstream 1.0kb downstream 3478 true scaffold_1: 8014586-8018063 Eutrema salsugineum
Thhalv10025046m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8014586-8015585 Eutrema salsugineum
Thhalv10025046m.g 2.0kb upstream 2.0kb upstream 4478 true scaffold_1: 8015586-8020063 Eutrema salsugineum
Thhalv10025046m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8018064-8020063 Eutrema salsugineum
Thhalv10025046m.g 2.0kb downstream 2.0kb downstream 4478 true scaffold_1: 8013586-8018063 Eutrema salsugineum
Thhalv10025046m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8013586-8015585 Eutrema salsugineum
Thhalv10025046m.g 5.0kb upstream 5.0kb upstream 7478 true scaffold_1: 8015586-8023063 Eutrema salsugineum
Thhalv10025046m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8018064-8023063 Eutrema salsugineum
Thhalv10025046m.g 5.0kb downstream 5.0kb downstream 7478 true scaffold_1: 8010586-8018063 Eutrema salsugineum
Thhalv10025046m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8010586-8015585 Eutrema salsugineum
Thhalv10025046m.g 10.0kb upstream 10.0kb upstream 12478 true scaffold_1: 8015586-8028063 Eutrema salsugineum
Thhalv10025046m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8018064-8028063 Eutrema salsugineum
Thhalv10025046m.g 10.0kb downstream 10.0kb downstream 12478 true scaffold_1: 8005586-8018063 Eutrema salsugineum
Thhalv10025046m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8005586-8015585 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366251 5261 Brassicaceae View MSA
123799137 5264 Brassicales-Malvales View MSA
124296686 5266 SBM View MSA
124247883 5268 Malvidae View MSA
124066639 5270 Rosid View MSA
123737091 5271 Pentapetalae View MSA
122793625 5272 Eudicot View MSA
122045440 5273 Angiosperm View MSA
121350923 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain