Gene : Thhalv10025326m.g E. salsugineum v1.0
Defline:  (1 of 4) PTHR23023:SF37 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA2-RELATED Genomic Order:  2973
Name:  ? Thhalv10025326m.g Secondary Identifier:  ? PAC:20195945
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWYDQC-4 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10025326m.g 0.5kb upstream 0.5kb upstream 2244 true scaffold_1: 18114597-18116840 Eutrema salsugineum
Thhalv10025326m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 18116341-18116840 Eutrema salsugineum
Thhalv10025326m.g 0.5kb downstream 0.5kb downstream 2244 true scaffold_1: 18114097-18116340 Eutrema salsugineum
Thhalv10025326m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 18114097-18114596 Eutrema salsugineum
Thhalv10025326m.g 1.0kb upstream 1.0kb upstream 2744 true scaffold_1: 18114597-18117340 Eutrema salsugineum
Thhalv10025326m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 18116341-18117340 Eutrema salsugineum
Thhalv10025326m.g 1.0kb downstream 1.0kb downstream 2744 true scaffold_1: 18113597-18116340 Eutrema salsugineum
Thhalv10025326m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 18113597-18114596 Eutrema salsugineum
Thhalv10025326m.g 2.0kb upstream 2.0kb upstream 3744 true scaffold_1: 18114597-18118340 Eutrema salsugineum
Thhalv10025326m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 18116341-18118340 Eutrema salsugineum
Thhalv10025326m.g 2.0kb downstream 2.0kb downstream 3744 true scaffold_1: 18112597-18116340 Eutrema salsugineum
Thhalv10025326m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 18112597-18114596 Eutrema salsugineum
Thhalv10025326m.g 5.0kb upstream 5.0kb upstream 6744 true scaffold_1: 18114597-18121340 Eutrema salsugineum
Thhalv10025326m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 18116341-18121340 Eutrema salsugineum
Thhalv10025326m.g 5.0kb downstream 5.0kb downstream 6744 true scaffold_1: 18109597-18116340 Eutrema salsugineum
Thhalv10025326m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 18109597-18114596 Eutrema salsugineum
Thhalv10025326m.g 10.0kb upstream 10.0kb upstream 11744 true scaffold_1: 18114597-18126340 Eutrema salsugineum
Thhalv10025326m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 18116341-18126340 Eutrema salsugineum
Thhalv10025326m.g 10.0kb downstream 10.0kb downstream 11744 true scaffold_1: 18104597-18116340 Eutrema salsugineum
Thhalv10025326m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 18104597-18114596 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377268 5261 Brassicaceae View MSA
123836522 5264 Brassicales-Malvales View MSA
124322177 5266 SBM View MSA
124244331 5268 Malvidae View MSA
124069370 5270 Rosid View MSA
123747095 5271 Pentapetalae View MSA
122790040 5272 Eudicot View MSA
122050610 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain