Gene : Thhalv10025435m.g E. salsugineum v1.0
Defline:  (1 of 2) 1.1.1.27 - L-lactate dehydrogenase / L-lactic dehydrogenase Genomic Order:  2325
Name:  ? Thhalv10025435m.g Secondary Identifier:  ? PAC:20193168
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum ANAEROFRUCAT-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-5481 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10025435m.g 0.5kb upstream 0.5kb upstream 1985 true scaffold_1: 10139015-10140999 Eutrema salsugineum
Thhalv10025435m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 10140500-10140999 Eutrema salsugineum
Thhalv10025435m.g 0.5kb downstream 0.5kb downstream 1985 true scaffold_1: 10138515-10140499 Eutrema salsugineum
Thhalv10025435m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 10138515-10139014 Eutrema salsugineum
Thhalv10025435m.g 1.0kb upstream 1.0kb upstream 2485 true scaffold_1: 10139015-10141499 Eutrema salsugineum
Thhalv10025435m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 10140500-10141499 Eutrema salsugineum
Thhalv10025435m.g 1.0kb downstream 1.0kb downstream 2485 true scaffold_1: 10138015-10140499 Eutrema salsugineum
Thhalv10025435m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 10138015-10139014 Eutrema salsugineum
Thhalv10025435m.g 2.0kb upstream 2.0kb upstream 3485 true scaffold_1: 10139015-10142499 Eutrema salsugineum
Thhalv10025435m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 10140500-10142499 Eutrema salsugineum
Thhalv10025435m.g 2.0kb downstream 2.0kb downstream 3485 true scaffold_1: 10137015-10140499 Eutrema salsugineum
Thhalv10025435m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 10137015-10139014 Eutrema salsugineum
Thhalv10025435m.g 5.0kb upstream 5.0kb upstream 6485 true scaffold_1: 10139015-10145499 Eutrema salsugineum
Thhalv10025435m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 10140500-10145499 Eutrema salsugineum
Thhalv10025435m.g 5.0kb downstream 5.0kb downstream 6485 true scaffold_1: 10134015-10140499 Eutrema salsugineum
Thhalv10025435m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 10134015-10139014 Eutrema salsugineum
Thhalv10025435m.g 10.0kb upstream 10.0kb upstream 11485 true scaffold_1: 10139015-10150499 Eutrema salsugineum
Thhalv10025435m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 10140500-10150499 Eutrema salsugineum
Thhalv10025435m.g 10.0kb downstream 10.0kb downstream 11485 true scaffold_1: 10129015-10140499 Eutrema salsugineum
Thhalv10025435m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 10129015-10139014 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380281 5261 Brassicaceae View MSA
123834652 5264 Brassicales-Malvales View MSA
124340660 5266 SBM View MSA
124253081 5268 Malvidae View MSA
124064441 5270 Rosid View MSA
123739146 5271 Pentapetalae View MSA
122785845 5272 Eudicot View MSA
122045770 5273 Angiosperm View MSA
121350532 5274 Embryophyte View MSA
123381776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain