Gene : Thhalv10026088m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR13069:SF11 - ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 6 Genomic Order:  1985
Name:  ? Thhalv10026088m.g Secondary Identifier:  ? PAC:20193195
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-6829 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10026088m.g 0.5kb upstream 0.5kb upstream 2274 true scaffold_1: 8409673-8411946 Eutrema salsugineum
Thhalv10026088m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8411447-8411946 Eutrema salsugineum
Thhalv10026088m.g 0.5kb downstream 0.5kb downstream 2274 true scaffold_1: 8409173-8411446 Eutrema salsugineum
Thhalv10026088m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8409173-8409672 Eutrema salsugineum
Thhalv10026088m.g 1.0kb upstream 1.0kb upstream 2774 true scaffold_1: 8409673-8412446 Eutrema salsugineum
Thhalv10026088m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8411447-8412446 Eutrema salsugineum
Thhalv10026088m.g 1.0kb downstream 1.0kb downstream 2774 true scaffold_1: 8408673-8411446 Eutrema salsugineum
Thhalv10026088m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8408673-8409672 Eutrema salsugineum
Thhalv10026088m.g 2.0kb upstream 2.0kb upstream 3774 true scaffold_1: 8409673-8413446 Eutrema salsugineum
Thhalv10026088m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8411447-8413446 Eutrema salsugineum
Thhalv10026088m.g 2.0kb downstream 2.0kb downstream 3774 true scaffold_1: 8407673-8411446 Eutrema salsugineum
Thhalv10026088m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8407673-8409672 Eutrema salsugineum
Thhalv10026088m.g 5.0kb upstream 5.0kb upstream 6774 true scaffold_1: 8409673-8416446 Eutrema salsugineum
Thhalv10026088m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8411447-8416446 Eutrema salsugineum
Thhalv10026088m.g 5.0kb downstream 5.0kb downstream 6774 true scaffold_1: 8404673-8411446 Eutrema salsugineum
Thhalv10026088m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8404673-8409672 Eutrema salsugineum
Thhalv10026088m.g 10.0kb upstream 10.0kb upstream 11774 true scaffold_1: 8409673-8421446 Eutrema salsugineum
Thhalv10026088m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8411447-8421446 Eutrema salsugineum
Thhalv10026088m.g 10.0kb downstream 10.0kb downstream 11774 true scaffold_1: 8399673-8411446 Eutrema salsugineum
Thhalv10026088m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8399673-8409672 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364039 5261 Brassicaceae View MSA
123835550 5264 Brassicales-Malvales View MSA
124341724 5266 SBM View MSA
124239519 5268 Malvidae View MSA
124065403 5270 Rosid View MSA
123740890 5271 Pentapetalae View MSA
122791933 5272 Eudicot View MSA
122044180 5273 Angiosperm View MSA
121345583 5274 Embryophyte View MSA
123428839 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain