Gene : Thhalv10026062m.g E. salsugineum v1.0
Defline:  (1 of 3) 2.7.7.15 - Choline-phosphate cytidylyltransferase / Phosphorylcholine transferase Genomic Order:  2616
Name:  ? Thhalv10026062m.g Secondary Identifier:  ? PAC:20194249
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-3561 Eutrema salsugineum pathologic  
Esalsugineum PWY3O-450 Eutrema salsugineum pathologic  
Esalsugineum PWY4FS-2 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10026062m.g 0.5kb upstream 0.5kb upstream 2552 true scaffold_1: 12252800-12255351 Eutrema salsugineum
Thhalv10026062m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 12254852-12255351 Eutrema salsugineum
Thhalv10026062m.g 0.5kb downstream 0.5kb downstream 2552 true scaffold_1: 12252300-12254851 Eutrema salsugineum
Thhalv10026062m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 12252300-12252799 Eutrema salsugineum
Thhalv10026062m.g 1.0kb upstream 1.0kb upstream 3052 true scaffold_1: 12252800-12255851 Eutrema salsugineum
Thhalv10026062m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 12254852-12255851 Eutrema salsugineum
Thhalv10026062m.g 1.0kb downstream 1.0kb downstream 3052 true scaffold_1: 12251800-12254851 Eutrema salsugineum
Thhalv10026062m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 12251800-12252799 Eutrema salsugineum
Thhalv10026062m.g 2.0kb upstream 2.0kb upstream 4052 true scaffold_1: 12252800-12256851 Eutrema salsugineum
Thhalv10026062m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 12254852-12256851 Eutrema salsugineum
Thhalv10026062m.g 2.0kb downstream 2.0kb downstream 4052 true scaffold_1: 12250800-12254851 Eutrema salsugineum
Thhalv10026062m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 12250800-12252799 Eutrema salsugineum
Thhalv10026062m.g 5.0kb upstream 5.0kb upstream 7052 true scaffold_1: 12252800-12259851 Eutrema salsugineum
Thhalv10026062m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 12254852-12259851 Eutrema salsugineum
Thhalv10026062m.g 5.0kb downstream 5.0kb downstream 7052 true scaffold_1: 12247800-12254851 Eutrema salsugineum
Thhalv10026062m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 12247800-12252799 Eutrema salsugineum
Thhalv10026062m.g 10.0kb upstream 10.0kb upstream 12052 true scaffold_1: 12252800-12264851 Eutrema salsugineum
Thhalv10026062m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 12254852-12264851 Eutrema salsugineum
Thhalv10026062m.g 10.0kb downstream 10.0kb downstream 12052 true scaffold_1: 12242800-12254851 Eutrema salsugineum
Thhalv10026062m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 12242800-12252799 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373110 5261 Brassicaceae View MSA
123800495 5264 Brassicales-Malvales View MSA
124297906 5266 SBM View MSA
124149683 5268 Malvidae View MSA
124069985 5270 Rosid View MSA
123749333 5271 Pentapetalae View MSA
122792398 5272 Eudicot View MSA
122047197 5273 Angiosperm View MSA
121348751 5274 Embryophyte View MSA
123428717 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain