Gene : Thhalv10026218m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR11404:SF24 - SUPEROXIDE DISMUTASE [FE] 2, CHLOROPLASTIC Genomic Order:  1525
Name:  ? Thhalv10026218m.g Secondary Identifier:  ? PAC:20194222
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum DETOX1-PWY Eutrema salsugineum pathologic  
Esalsugineum DETOX1-PWY-1 Eutrema salsugineum pathologic  
Esalsugineum PWY-6854 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10026218m.g 0.5kb upstream 0.5kb upstream 2967 true scaffold_1: 6352185-6355151 Eutrema salsugineum
Thhalv10026218m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6352185-6352684 Eutrema salsugineum
Thhalv10026218m.g 0.5kb downstream 0.5kb downstream 2967 true scaffold_1: 6352685-6355651 Eutrema salsugineum
Thhalv10026218m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6355152-6355651 Eutrema salsugineum
Thhalv10026218m.g 1.0kb upstream 1.0kb upstream 3467 true scaffold_1: 6351685-6355151 Eutrema salsugineum
Thhalv10026218m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6351685-6352684 Eutrema salsugineum
Thhalv10026218m.g 1.0kb downstream 1.0kb downstream 3467 true scaffold_1: 6352685-6356151 Eutrema salsugineum
Thhalv10026218m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6355152-6356151 Eutrema salsugineum
Thhalv10026218m.g 2.0kb upstream 2.0kb upstream 4467 true scaffold_1: 6350685-6355151 Eutrema salsugineum
Thhalv10026218m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6350685-6352684 Eutrema salsugineum
Thhalv10026218m.g 2.0kb downstream 2.0kb downstream 4467 true scaffold_1: 6352685-6357151 Eutrema salsugineum
Thhalv10026218m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6355152-6357151 Eutrema salsugineum
Thhalv10026218m.g 5.0kb upstream 5.0kb upstream 7467 true scaffold_1: 6347685-6355151 Eutrema salsugineum
Thhalv10026218m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6347685-6352684 Eutrema salsugineum
Thhalv10026218m.g 5.0kb downstream 5.0kb downstream 7467 true scaffold_1: 6352685-6360151 Eutrema salsugineum
Thhalv10026218m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6355152-6360151 Eutrema salsugineum
Thhalv10026218m.g 10.0kb upstream 10.0kb upstream 12467 true scaffold_1: 6342685-6355151 Eutrema salsugineum
Thhalv10026218m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6342685-6352684 Eutrema salsugineum
Thhalv10026218m.g 10.0kb downstream 10.0kb downstream 12467 true scaffold_1: 6352685-6365151 Eutrema salsugineum
Thhalv10026218m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6355152-6365151 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370198 5261 Brassicaceae View MSA
123799915 5264 Brassicales-Malvales View MSA
124297385 5266 SBM View MSA
124149294 5268 Malvidae View MSA
124072391 5270 Rosid View MSA
123741409 5271 Pentapetalae View MSA
122787652 5272 Eudicot View MSA
122047747 5273 Angiosperm View MSA
121351401 5274 Embryophyte View MSA
123425969 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain