Gene : Thhalv10025792m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR23416:SF63 - SERINE ACETYLTRANSFERASE 2-RELATED Genomic Order:  430
Name:  ? Thhalv10025792m.g Secondary Identifier:  ? PAC:20192946
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum CYSTSYN-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-6936 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10025792m.g 0.5kb upstream 0.5kb upstream 4218 true scaffold_1: 1854061-1858278 Eutrema salsugineum
Thhalv10025792m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1854061-1854560 Eutrema salsugineum
Thhalv10025792m.g 0.5kb downstream 0.5kb downstream 4218 true scaffold_1: 1854561-1858778 Eutrema salsugineum
Thhalv10025792m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1858279-1858778 Eutrema salsugineum
Thhalv10025792m.g 1.0kb upstream 1.0kb upstream 4718 true scaffold_1: 1853561-1858278 Eutrema salsugineum
Thhalv10025792m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1853561-1854560 Eutrema salsugineum
Thhalv10025792m.g 1.0kb downstream 1.0kb downstream 4718 true scaffold_1: 1854561-1859278 Eutrema salsugineum
Thhalv10025792m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1858279-1859278 Eutrema salsugineum
Thhalv10025792m.g 2.0kb upstream 2.0kb upstream 5718 true scaffold_1: 1852561-1858278 Eutrema salsugineum
Thhalv10025792m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1852561-1854560 Eutrema salsugineum
Thhalv10025792m.g 2.0kb downstream 2.0kb downstream 5718 true scaffold_1: 1854561-1860278 Eutrema salsugineum
Thhalv10025792m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1858279-1860278 Eutrema salsugineum
Thhalv10025792m.g 5.0kb upstream 5.0kb upstream 8718 true scaffold_1: 1849561-1858278 Eutrema salsugineum
Thhalv10025792m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1849561-1854560 Eutrema salsugineum
Thhalv10025792m.g 5.0kb downstream 5.0kb downstream 8718 true scaffold_1: 1854561-1863278 Eutrema salsugineum
Thhalv10025792m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1858279-1863278 Eutrema salsugineum
Thhalv10025792m.g 10.0kb upstream 10.0kb upstream 13718 true scaffold_1: 1844561-1858278 Eutrema salsugineum
Thhalv10025792m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1844561-1854560 Eutrema salsugineum
Thhalv10025792m.g 10.0kb downstream 10.0kb downstream 13718 true scaffold_1: 1854561-1868278 Eutrema salsugineum
Thhalv10025792m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1858279-1868278 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377353 5261 Brassicaceae View MSA
123838527 5264 Brassicales-Malvales View MSA
124322470 5266 SBM View MSA
124240190 5268 Malvidae View MSA
124063279 5270 Rosid View MSA
123743402 5271 Pentapetalae View MSA
122788102 5272 Eudicot View MSA
122045908 5273 Angiosperm View MSA
121349787 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain