Gene : Thhalv10026852m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR11592:SF11 - PHOSPHOLIPID HYDROPEROXIDE GLUTATHIONE PEROXIDASE 1, CHLOROPLASTIC-RELATED Genomic Order:  815
Name:  ? Thhalv10026852m.g Secondary Identifier:  ? PAC:20195487
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-4081 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10026852m.g 0.5kb upstream 0.5kb upstream 1960 true scaffold_1: 3456273-3458232 Eutrema salsugineum
Thhalv10026852m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3457733-3458232 Eutrema salsugineum
Thhalv10026852m.g 0.5kb downstream 0.5kb downstream 1960 true scaffold_1: 3455773-3457732 Eutrema salsugineum
Thhalv10026852m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3455773-3456272 Eutrema salsugineum
Thhalv10026852m.g 1.0kb upstream 1.0kb upstream 2460 true scaffold_1: 3456273-3458732 Eutrema salsugineum
Thhalv10026852m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3457733-3458732 Eutrema salsugineum
Thhalv10026852m.g 1.0kb downstream 1.0kb downstream 2460 true scaffold_1: 3455273-3457732 Eutrema salsugineum
Thhalv10026852m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3455273-3456272 Eutrema salsugineum
Thhalv10026852m.g 2.0kb upstream 2.0kb upstream 3460 true scaffold_1: 3456273-3459732 Eutrema salsugineum
Thhalv10026852m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3457733-3459732 Eutrema salsugineum
Thhalv10026852m.g 2.0kb downstream 2.0kb downstream 3460 true scaffold_1: 3454273-3457732 Eutrema salsugineum
Thhalv10026852m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3454273-3456272 Eutrema salsugineum
Thhalv10026852m.g 5.0kb upstream 5.0kb upstream 6460 true scaffold_1: 3456273-3462732 Eutrema salsugineum
Thhalv10026852m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3457733-3462732 Eutrema salsugineum
Thhalv10026852m.g 5.0kb downstream 5.0kb downstream 6460 true scaffold_1: 3451273-3457732 Eutrema salsugineum
Thhalv10026852m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3451273-3456272 Eutrema salsugineum
Thhalv10026852m.g 10.0kb upstream 10.0kb upstream 11460 true scaffold_1: 3456273-3467732 Eutrema salsugineum
Thhalv10026852m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3457733-3467732 Eutrema salsugineum
Thhalv10026852m.g 10.0kb downstream 10.0kb downstream 11460 true scaffold_1: 3446273-3457732 Eutrema salsugineum
Thhalv10026852m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3446273-3456272 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379433 5261 Brassicaceae View MSA
123838768 5264 Brassicales-Malvales View MSA
124342773 5266 SBM View MSA
124240030 5268 Malvidae View MSA
124063282 5270 Rosid View MSA
123740898 5271 Pentapetalae View MSA
122792011 5272 Eudicot View MSA
122046042 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain