Gene : Thhalv10026965m.g E. salsugineum v1.0
Defline:  (1 of 4) PTHR23023:SF37 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA2-RELATED Genomic Order:  747
Name:  ? Thhalv10026965m.g Secondary Identifier:  ? PAC:20193322
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWYDQC-4 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10026965m.g 0.5kb upstream 0.5kb upstream 2532 true scaffold_1: 3187064-3189595 Eutrema salsugineum
Thhalv10026965m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3189096-3189595 Eutrema salsugineum
Thhalv10026965m.g 0.5kb downstream 0.5kb downstream 2532 true scaffold_1: 3186564-3189095 Eutrema salsugineum
Thhalv10026965m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3186564-3187063 Eutrema salsugineum
Thhalv10026965m.g 1.0kb upstream 1.0kb upstream 3032 true scaffold_1: 3187064-3190095 Eutrema salsugineum
Thhalv10026965m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3189096-3190095 Eutrema salsugineum
Thhalv10026965m.g 1.0kb downstream 1.0kb downstream 3032 true scaffold_1: 3186064-3189095 Eutrema salsugineum
Thhalv10026965m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3186064-3187063 Eutrema salsugineum
Thhalv10026965m.g 2.0kb upstream 2.0kb upstream 4032 true scaffold_1: 3187064-3191095 Eutrema salsugineum
Thhalv10026965m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3189096-3191095 Eutrema salsugineum
Thhalv10026965m.g 2.0kb downstream 2.0kb downstream 4032 true scaffold_1: 3185064-3189095 Eutrema salsugineum
Thhalv10026965m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3185064-3187063 Eutrema salsugineum
Thhalv10026965m.g 5.0kb upstream 5.0kb upstream 7032 true scaffold_1: 3187064-3194095 Eutrema salsugineum
Thhalv10026965m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3189096-3194095 Eutrema salsugineum
Thhalv10026965m.g 5.0kb downstream 5.0kb downstream 7032 true scaffold_1: 3182064-3189095 Eutrema salsugineum
Thhalv10026965m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3182064-3187063 Eutrema salsugineum
Thhalv10026965m.g 10.0kb upstream 10.0kb upstream 12032 true scaffold_1: 3187064-3199095 Eutrema salsugineum
Thhalv10026965m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3189096-3199095 Eutrema salsugineum
Thhalv10026965m.g 10.0kb downstream 10.0kb downstream 12032 true scaffold_1: 3177064-3189095 Eutrema salsugineum
Thhalv10026965m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3177064-3187063 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367253 5261 Brassicaceae View MSA
123799321 5264 Brassicales-Malvales View MSA
124296854 5266 SBM View MSA
124252107 5268 Malvidae View MSA
124066807 5270 Rosid View MSA
123736759 5271 Pentapetalae View MSA
122792944 5272 Eudicot View MSA
122049474 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain