Gene : Thhalv10026478m.g E. salsugineum v1.0
Defline:  (1 of 4) 1.1.1.39 - Malate dehydrogenase (decarboxylating) / Pyruvic-malic carboxylase Genomic Order:  2922
Name:  ? Thhalv10026478m.g Secondary Identifier:  ? PAC:20194785
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum GLUCONEO-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-7115 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10026478m.g 0.5kb upstream 0.5kb upstream 1666 true scaffold_1: 16562421-16564086 Eutrema salsugineum
Thhalv10026478m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 16562421-16562920 Eutrema salsugineum
Thhalv10026478m.g 0.5kb downstream 0.5kb downstream 1666 true scaffold_1: 16562921-16564586 Eutrema salsugineum
Thhalv10026478m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 16564087-16564586 Eutrema salsugineum
Thhalv10026478m.g 1.0kb upstream 1.0kb upstream 2166 true scaffold_1: 16561921-16564086 Eutrema salsugineum
Thhalv10026478m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 16561921-16562920 Eutrema salsugineum
Thhalv10026478m.g 1.0kb downstream 1.0kb downstream 2166 true scaffold_1: 16562921-16565086 Eutrema salsugineum
Thhalv10026478m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 16564087-16565086 Eutrema salsugineum
Thhalv10026478m.g 2.0kb upstream 2.0kb upstream 3166 true scaffold_1: 16560921-16564086 Eutrema salsugineum
Thhalv10026478m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 16560921-16562920 Eutrema salsugineum
Thhalv10026478m.g 2.0kb downstream 2.0kb downstream 3166 true scaffold_1: 16562921-16566086 Eutrema salsugineum
Thhalv10026478m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 16564087-16566086 Eutrema salsugineum
Thhalv10026478m.g 5.0kb upstream 5.0kb upstream 6166 true scaffold_1: 16557921-16564086 Eutrema salsugineum
Thhalv10026478m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 16557921-16562920 Eutrema salsugineum
Thhalv10026478m.g 5.0kb downstream 5.0kb downstream 6166 true scaffold_1: 16562921-16569086 Eutrema salsugineum
Thhalv10026478m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 16564087-16569086 Eutrema salsugineum
Thhalv10026478m.g 10.0kb upstream 10.0kb upstream 11166 true scaffold_1: 16552921-16564086 Eutrema salsugineum
Thhalv10026478m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 16552921-16562920 Eutrema salsugineum
Thhalv10026478m.g 10.0kb downstream 10.0kb downstream 11166 true scaffold_1: 16562921-16574086 Eutrema salsugineum
Thhalv10026478m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 16564087-16574086 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122356587 5261 Brassicaceae Singleton cluster - no MSA
123794696 5264 Brassicales-Malvales Singleton cluster - no MSA
124292494 5266 SBM Singleton cluster - no MSA
124250396 5268 Malvidae View MSA
124063227 5270 Rosid View MSA
123749202 5271 Pentapetalae View MSA
122796678 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain