Gene : Thhalv10026533m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR31747:SF3 - PROTEIN LSD1 Genomic Order:  1981
Name:  ? Thhalv10026533m.g Secondary Identifier:  ? PAC:20196122
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10026533m.g 0.5kb upstream 0.5kb upstream 1950 true scaffold_1: 8398962-8400911 Eutrema salsugineum
Thhalv10026533m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8400412-8400911 Eutrema salsugineum
Thhalv10026533m.g 0.5kb downstream 0.5kb downstream 1950 true scaffold_1: 8398462-8400411 Eutrema salsugineum
Thhalv10026533m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8398462-8398961 Eutrema salsugineum
Thhalv10026533m.g 1.0kb upstream 1.0kb upstream 2450 true scaffold_1: 8398962-8401411 Eutrema salsugineum
Thhalv10026533m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8400412-8401411 Eutrema salsugineum
Thhalv10026533m.g 1.0kb downstream 1.0kb downstream 2450 true scaffold_1: 8397962-8400411 Eutrema salsugineum
Thhalv10026533m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8397962-8398961 Eutrema salsugineum
Thhalv10026533m.g 2.0kb upstream 2.0kb upstream 3450 true scaffold_1: 8398962-8402411 Eutrema salsugineum
Thhalv10026533m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8400412-8402411 Eutrema salsugineum
Thhalv10026533m.g 2.0kb downstream 2.0kb downstream 3450 true scaffold_1: 8396962-8400411 Eutrema salsugineum
Thhalv10026533m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8396962-8398961 Eutrema salsugineum
Thhalv10026533m.g 5.0kb upstream 5.0kb upstream 6450 true scaffold_1: 8398962-8405411 Eutrema salsugineum
Thhalv10026533m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8400412-8405411 Eutrema salsugineum
Thhalv10026533m.g 5.0kb downstream 5.0kb downstream 6450 true scaffold_1: 8393962-8400411 Eutrema salsugineum
Thhalv10026533m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8393962-8398961 Eutrema salsugineum
Thhalv10026533m.g 10.0kb upstream 10.0kb upstream 11450 true scaffold_1: 8398962-8410411 Eutrema salsugineum
Thhalv10026533m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8400412-8410411 Eutrema salsugineum
Thhalv10026533m.g 10.0kb downstream 10.0kb downstream 11450 true scaffold_1: 8388962-8400411 Eutrema salsugineum
Thhalv10026533m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8388962-8398961 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122356715 5261 Brassicaceae Singleton cluster - no MSA
123794814 5264 Brassicales-Malvales Singleton cluster - no MSA
124292612 5266 SBM Singleton cluster - no MSA
124255600 5268 Malvidae View MSA
123953230 5270 Rosid View MSA
123749218 5271 Pentapetalae View MSA
122793241 5272 Eudicot View MSA
122043941 5273 Angiosperm View MSA
121347680 5274 Embryophyte View MSA
123425652 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain