Gene : Thhalv10026527m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR11387:SF17 - CYTOCHROME C OXIDASE SUBUNIT 6B-LIKE-RELATED Genomic Order:  1214
Name:  ? Thhalv10026527m.g Secondary Identifier:  ? PAC:20193197
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-3781 Eutrema salsugineum pathologic  
Esalsugineum PWY-7279 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10026527m.g 0.5kb upstream 0.5kb upstream 2369 true scaffold_1: 5173647-5176015 Eutrema salsugineum
Thhalv10026527m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5173647-5174146 Eutrema salsugineum
Thhalv10026527m.g 0.5kb downstream 0.5kb downstream 2369 true scaffold_1: 5174147-5176515 Eutrema salsugineum
Thhalv10026527m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5176016-5176515 Eutrema salsugineum
Thhalv10026527m.g 1.0kb upstream 1.0kb upstream 2869 true scaffold_1: 5173147-5176015 Eutrema salsugineum
Thhalv10026527m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5173147-5174146 Eutrema salsugineum
Thhalv10026527m.g 1.0kb downstream 1.0kb downstream 2869 true scaffold_1: 5174147-5177015 Eutrema salsugineum
Thhalv10026527m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5176016-5177015 Eutrema salsugineum
Thhalv10026527m.g 2.0kb upstream 2.0kb upstream 3869 true scaffold_1: 5172147-5176015 Eutrema salsugineum
Thhalv10026527m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5172147-5174146 Eutrema salsugineum
Thhalv10026527m.g 2.0kb downstream 2.0kb downstream 3869 true scaffold_1: 5174147-5178015 Eutrema salsugineum
Thhalv10026527m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5176016-5178015 Eutrema salsugineum
Thhalv10026527m.g 5.0kb upstream 5.0kb upstream 6869 true scaffold_1: 5169147-5176015 Eutrema salsugineum
Thhalv10026527m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5169147-5174146 Eutrema salsugineum
Thhalv10026527m.g 5.0kb downstream 5.0kb downstream 6869 true scaffold_1: 5174147-5181015 Eutrema salsugineum
Thhalv10026527m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5176016-5181015 Eutrema salsugineum
Thhalv10026527m.g 10.0kb upstream 10.0kb upstream 11869 true scaffold_1: 5164147-5176015 Eutrema salsugineum
Thhalv10026527m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5164147-5174146 Eutrema salsugineum
Thhalv10026527m.g 10.0kb downstream 10.0kb downstream 11869 true scaffold_1: 5174147-5186015 Eutrema salsugineum
Thhalv10026527m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5176016-5186015 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121508026 5273 Angiosperm Singleton cluster - no MSA
122356423 5261 Brassicaceae Singleton cluster - no MSA
123794543 5264 Brassicales-Malvales Singleton cluster - no MSA
124292347 5266 SBM Singleton cluster - no MSA
124145134 5268 Malvidae Singleton cluster - no MSA
123871571 5270 Rosid Singleton cluster - no MSA
123455788 5271 Pentapetalae Singleton cluster - no MSA
122491221 5272 Eudicot Singleton cluster - no MSA
121351047 5274 Embryophyte View MSA
123424784 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain