Gene : Thhalv10016125m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR12741:SF9 - CALLOSE SYNTHASE 1-RELATED Genomic Order:  550
Name:  ? Thhalv10016125m.g Secondary Identifier:  ? PAC:20179567
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-6773 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10016125m.g 0.5kb upstream 0.5kb upstream 11324 true scaffold_10: 6613966-6625289 Eutrema salsugineum
Thhalv10016125m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_10: 6613966-6614465 Eutrema salsugineum
Thhalv10016125m.g 0.5kb downstream 0.5kb downstream 11324 true scaffold_10: 6614466-6625789 Eutrema salsugineum
Thhalv10016125m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_10: 6625290-6625789 Eutrema salsugineum
Thhalv10016125m.g 1.0kb upstream 1.0kb upstream 11824 true scaffold_10: 6613466-6625289 Eutrema salsugineum
Thhalv10016125m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_10: 6613466-6614465 Eutrema salsugineum
Thhalv10016125m.g 1.0kb downstream 1.0kb downstream 11824 true scaffold_10: 6614466-6626289 Eutrema salsugineum
Thhalv10016125m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_10: 6625290-6626289 Eutrema salsugineum
Thhalv10016125m.g 2.0kb upstream 2.0kb upstream 12824 true scaffold_10: 6612466-6625289 Eutrema salsugineum
Thhalv10016125m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_10: 6612466-6614465 Eutrema salsugineum
Thhalv10016125m.g 2.0kb downstream 2.0kb downstream 12824 true scaffold_10: 6614466-6627289 Eutrema salsugineum
Thhalv10016125m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_10: 6625290-6627289 Eutrema salsugineum
Thhalv10016125m.g 5.0kb upstream 5.0kb upstream 15824 true scaffold_10: 6609466-6625289 Eutrema salsugineum
Thhalv10016125m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_10: 6609466-6614465 Eutrema salsugineum
Thhalv10016125m.g 5.0kb downstream 5.0kb downstream 15824 true scaffold_10: 6614466-6630289 Eutrema salsugineum
Thhalv10016125m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_10: 6625290-6630289 Eutrema salsugineum
Thhalv10016125m.g 10.0kb upstream 10.0kb upstream 20824 true scaffold_10: 6604466-6625289 Eutrema salsugineum
Thhalv10016125m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_10: 6604466-6614465 Eutrema salsugineum
Thhalv10016125m.g 10.0kb downstream 10.0kb downstream 20824 true scaffold_10: 6614466-6635289 Eutrema salsugineum
Thhalv10016125m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_10: 6625290-6635289 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368152 5261 Brassicaceae View MSA
123839763 5264 Brassicales-Malvales View MSA
124346959 5266 SBM View MSA
124251802 5268 Malvidae View MSA
124072639 5270 Rosid View MSA
123745171 5271 Pentapetalae View MSA
122788947 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain