Gene : Thhalv10027167m.g E. salsugineum v1.0
Defline:  (1 of 5) PTHR31080:SF2 - F23N19.14-RELATED Genomic Order:  1509
Name:  ? Thhalv10027167m.g Secondary Identifier:  ? PAC:20193846
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-1081 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10027167m.g 0.5kb upstream 0.5kb upstream 1103 true scaffold_1: 6295346-6296448 Eutrema salsugineum
Thhalv10027167m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6295949-6296448 Eutrema salsugineum
Thhalv10027167m.g 0.5kb downstream 0.5kb downstream 1103 true scaffold_1: 6294846-6295948 Eutrema salsugineum
Thhalv10027167m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6294846-6295345 Eutrema salsugineum
Thhalv10027167m.g 1.0kb upstream 1.0kb upstream 1603 true scaffold_1: 6295346-6296948 Eutrema salsugineum
Thhalv10027167m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6295949-6296948 Eutrema salsugineum
Thhalv10027167m.g 1.0kb downstream 1.0kb downstream 1603 true scaffold_1: 6294346-6295948 Eutrema salsugineum
Thhalv10027167m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6294346-6295345 Eutrema salsugineum
Thhalv10027167m.g 2.0kb upstream 2.0kb upstream 2603 true scaffold_1: 6295346-6297948 Eutrema salsugineum
Thhalv10027167m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6295949-6297948 Eutrema salsugineum
Thhalv10027167m.g 2.0kb downstream 2.0kb downstream 2603 true scaffold_1: 6293346-6295948 Eutrema salsugineum
Thhalv10027167m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6293346-6295345 Eutrema salsugineum
Thhalv10027167m.g 5.0kb upstream 5.0kb upstream 5603 true scaffold_1: 6295346-6300948 Eutrema salsugineum
Thhalv10027167m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6295949-6300948 Eutrema salsugineum
Thhalv10027167m.g 5.0kb downstream 5.0kb downstream 5603 true scaffold_1: 6290346-6295948 Eutrema salsugineum
Thhalv10027167m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6290346-6295345 Eutrema salsugineum
Thhalv10027167m.g 10.0kb upstream 10.0kb upstream 10603 true scaffold_1: 6295346-6305948 Eutrema salsugineum
Thhalv10027167m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6295949-6305948 Eutrema salsugineum
Thhalv10027167m.g 10.0kb downstream 10.0kb downstream 10603 true scaffold_1: 6285346-6295948 Eutrema salsugineum
Thhalv10027167m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6285346-6295345 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362171 5261 Brassicaceae View MSA
123837730 5264 Brassicales-Malvales View MSA
124338445 5266 SBM View MSA
124251328 5268 Malvidae View MSA
124069066 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain