Gene : Thhalv10016334m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR23076//PTHR23076:SF60 - METALLOPROTEASE M41 FTSH Genomic Order:  433
Name:  ? Thhalv10016334m.g Secondary Identifier:  ? PAC:20180199
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10016334m.g 0.5kb upstream 0.5kb upstream 3430 true scaffold_10: 5953668-5957097 Eutrema salsugineum
Thhalv10016334m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_10: 5953668-5954167 Eutrema salsugineum
Thhalv10016334m.g 0.5kb downstream 0.5kb downstream 3430 true scaffold_10: 5954168-5957597 Eutrema salsugineum
Thhalv10016334m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_10: 5957098-5957597 Eutrema salsugineum
Thhalv10016334m.g 1.0kb upstream 1.0kb upstream 3930 true scaffold_10: 5953168-5957097 Eutrema salsugineum
Thhalv10016334m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_10: 5953168-5954167 Eutrema salsugineum
Thhalv10016334m.g 1.0kb downstream 1.0kb downstream 3930 true scaffold_10: 5954168-5958097 Eutrema salsugineum
Thhalv10016334m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_10: 5957098-5958097 Eutrema salsugineum
Thhalv10016334m.g 2.0kb upstream 2.0kb upstream 4930 true scaffold_10: 5952168-5957097 Eutrema salsugineum
Thhalv10016334m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_10: 5952168-5954167 Eutrema salsugineum
Thhalv10016334m.g 2.0kb downstream 2.0kb downstream 4930 true scaffold_10: 5954168-5959097 Eutrema salsugineum
Thhalv10016334m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_10: 5957098-5959097 Eutrema salsugineum
Thhalv10016334m.g 5.0kb upstream 5.0kb upstream 7930 true scaffold_10: 5949168-5957097 Eutrema salsugineum
Thhalv10016334m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_10: 5949168-5954167 Eutrema salsugineum
Thhalv10016334m.g 5.0kb downstream 5.0kb downstream 7930 true scaffold_10: 5954168-5962097 Eutrema salsugineum
Thhalv10016334m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_10: 5957098-5962097 Eutrema salsugineum
Thhalv10016334m.g 10.0kb upstream 10.0kb upstream 12930 true scaffold_10: 5944168-5957097 Eutrema salsugineum
Thhalv10016334m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_10: 5944168-5954167 Eutrema salsugineum
Thhalv10016334m.g 10.0kb downstream 10.0kb downstream 12930 true scaffold_10: 5954168-5967097 Eutrema salsugineum
Thhalv10016334m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_10: 5957098-5967097 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374340 5261 Brassicaceae View MSA
123839956 5264 Brassicales-Malvales View MSA
124341395 5266 SBM View MSA
124239029 5268 Malvidae View MSA
124067047 5270 Rosid View MSA
123736542 5271 Pentapetalae View MSA
122790199 5272 Eudicot View MSA
122046550 5273 Angiosperm View MSA
121351325 5274 Embryophyte View MSA
123426403 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain