Gene : Thhalv10016407m.g E. salsugineum v1.0
Defline:  (1 of 1) 2.1.2.3 - Phosphoribosylaminoimidazolecarboxamide formyltransferase / Aminoimidazolecarboxamide ribonucleotide transformylase Genomic Order:  851
Name:  ? Thhalv10016407m.g Secondary Identifier:  ? PAC:20180385
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-6124 Eutrema salsugineum pathologic  
Esalsugineum PWY-841 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10016407m.g 0.5kb upstream 0.5kb upstream 3839 true scaffold_10: 8031317-8035155 Eutrema salsugineum
Thhalv10016407m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_10: 8034656-8035155 Eutrema salsugineum
Thhalv10016407m.g 0.5kb downstream 0.5kb downstream 3839 true scaffold_10: 8030817-8034655 Eutrema salsugineum
Thhalv10016407m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_10: 8030817-8031316 Eutrema salsugineum
Thhalv10016407m.g 1.0kb upstream 1.0kb upstream 4339 true scaffold_10: 8031317-8035655 Eutrema salsugineum
Thhalv10016407m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_10: 8034656-8035655 Eutrema salsugineum
Thhalv10016407m.g 1.0kb downstream 1.0kb downstream 4339 true scaffold_10: 8030317-8034655 Eutrema salsugineum
Thhalv10016407m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_10: 8030317-8031316 Eutrema salsugineum
Thhalv10016407m.g 2.0kb upstream 2.0kb upstream 5339 true scaffold_10: 8031317-8036655 Eutrema salsugineum
Thhalv10016407m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_10: 8034656-8036655 Eutrema salsugineum
Thhalv10016407m.g 2.0kb downstream 2.0kb downstream 5339 true scaffold_10: 8029317-8034655 Eutrema salsugineum
Thhalv10016407m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_10: 8029317-8031316 Eutrema salsugineum
Thhalv10016407m.g 5.0kb upstream 5.0kb upstream 8339 true scaffold_10: 8031317-8039655 Eutrema salsugineum
Thhalv10016407m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_10: 8034656-8039655 Eutrema salsugineum
Thhalv10016407m.g 5.0kb downstream 5.0kb downstream 8339 true scaffold_10: 8026317-8034655 Eutrema salsugineum
Thhalv10016407m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_10: 8026317-8031316 Eutrema salsugineum
Thhalv10016407m.g 10.0kb upstream 10.0kb upstream 13339 true scaffold_10: 8031317-8044655 Eutrema salsugineum
Thhalv10016407m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_10: 8034656-8044655 Eutrema salsugineum
Thhalv10016407m.g 10.0kb downstream 10.0kb downstream 13339 true scaffold_10: 8021317-8034655 Eutrema salsugineum
Thhalv10016407m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_10: 8021317-8031316 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365790 5261 Brassicaceae View MSA
123829206 5264 Brassicales-Malvales View MSA
124338939 5266 SBM View MSA
124238777 5268 Malvidae View MSA
124063677 5270 Rosid View MSA
123740756 5271 Pentapetalae View MSA
122787954 5272 Eudicot View MSA
122042847 5273 Angiosperm View MSA
121346530 5274 Embryophyte View MSA
123425039 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain