Gene : Thhalv10016439m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR11709:SF22 - LACCASE-12-RELATED Genomic Order:  1408
Name:  ? Thhalv10016439m.g Secondary Identifier:  ? PAC:20180084
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5466 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10016439m.g 0.5kb upstream 0.5kb upstream 3364 true scaffold_10: 10755766-10759129 Eutrema salsugineum
Thhalv10016439m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_10: 10758630-10759129 Eutrema salsugineum
Thhalv10016439m.g 0.5kb downstream 0.5kb downstream 3364 true scaffold_10: 10755266-10758629 Eutrema salsugineum
Thhalv10016439m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_10: 10755266-10755765 Eutrema salsugineum
Thhalv10016439m.g 1.0kb upstream 1.0kb upstream 3864 true scaffold_10: 10755766-10759629 Eutrema salsugineum
Thhalv10016439m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_10: 10758630-10759629 Eutrema salsugineum
Thhalv10016439m.g 1.0kb downstream 1.0kb downstream 3864 true scaffold_10: 10754766-10758629 Eutrema salsugineum
Thhalv10016439m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_10: 10754766-10755765 Eutrema salsugineum
Thhalv10016439m.g 2.0kb upstream 2.0kb upstream 4864 true scaffold_10: 10755766-10760629 Eutrema salsugineum
Thhalv10016439m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_10: 10758630-10760629 Eutrema salsugineum
Thhalv10016439m.g 2.0kb downstream 2.0kb downstream 4864 true scaffold_10: 10753766-10758629 Eutrema salsugineum
Thhalv10016439m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_10: 10753766-10755765 Eutrema salsugineum
Thhalv10016439m.g 5.0kb upstream 5.0kb upstream 7864 true scaffold_10: 10755766-10763629 Eutrema salsugineum
Thhalv10016439m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_10: 10758630-10763629 Eutrema salsugineum
Thhalv10016439m.g 5.0kb downstream 5.0kb downstream 7864 true scaffold_10: 10750766-10758629 Eutrema salsugineum
Thhalv10016439m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_10: 10750766-10755765 Eutrema salsugineum
Thhalv10016439m.g 10.0kb upstream 10.0kb upstream 12864 true scaffold_10: 10755766-10768629 Eutrema salsugineum
Thhalv10016439m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_10: 10758630-10768629 Eutrema salsugineum
Thhalv10016439m.g 10.0kb downstream 10.0kb downstream 12864 true scaffold_10: 10745766-10758629 Eutrema salsugineum
Thhalv10016439m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_10: 10745766-10755765 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361054 5261 Brassicaceae View MSA
123837056 5264 Brassicales-Malvales View MSA
124338843 5266 SBM View MSA
124253319 5268 Malvidae View MSA
124063263 5270 Rosid View MSA
123746086 5271 Pentapetalae View MSA
122788360 5272 Eudicot View MSA
122044394 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain