Gene : Thhalv10016731m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR11624:SF76 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA-2, CHLOROPLASTIC-RELATED Genomic Order:  803
Name:  ? Thhalv10016731m.g Secondary Identifier:  ? PAC:20179936
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5173 Eutrema salsugineum pathologic  
Esalsugineum PWY-5464 Eutrema salsugineum pathologic  
Esalsugineum PYRUVDEHYD-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10016731m.g 0.5kb upstream 0.5kb upstream 3085 true scaffold_10: 7787570-7790654 Eutrema salsugineum
Thhalv10016731m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_10: 7790155-7790654 Eutrema salsugineum
Thhalv10016731m.g 0.5kb downstream 0.5kb downstream 3085 true scaffold_10: 7787070-7790154 Eutrema salsugineum
Thhalv10016731m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_10: 7787070-7787569 Eutrema salsugineum
Thhalv10016731m.g 1.0kb upstream 1.0kb upstream 3585 true scaffold_10: 7787570-7791154 Eutrema salsugineum
Thhalv10016731m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_10: 7790155-7791154 Eutrema salsugineum
Thhalv10016731m.g 1.0kb downstream 1.0kb downstream 3585 true scaffold_10: 7786570-7790154 Eutrema salsugineum
Thhalv10016731m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_10: 7786570-7787569 Eutrema salsugineum
Thhalv10016731m.g 2.0kb upstream 2.0kb upstream 4585 true scaffold_10: 7787570-7792154 Eutrema salsugineum
Thhalv10016731m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_10: 7790155-7792154 Eutrema salsugineum
Thhalv10016731m.g 2.0kb downstream 2.0kb downstream 4585 true scaffold_10: 7785570-7790154 Eutrema salsugineum
Thhalv10016731m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_10: 7785570-7787569 Eutrema salsugineum
Thhalv10016731m.g 5.0kb upstream 5.0kb upstream 7585 true scaffold_10: 7787570-7795154 Eutrema salsugineum
Thhalv10016731m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_10: 7790155-7795154 Eutrema salsugineum
Thhalv10016731m.g 5.0kb downstream 5.0kb downstream 7585 true scaffold_10: 7782570-7790154 Eutrema salsugineum
Thhalv10016731m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_10: 7782570-7787569 Eutrema salsugineum
Thhalv10016731m.g 10.0kb upstream 10.0kb upstream 12585 true scaffold_10: 7787570-7800154 Eutrema salsugineum
Thhalv10016731m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_10: 7790155-7800154 Eutrema salsugineum
Thhalv10016731m.g 10.0kb downstream 10.0kb downstream 12585 true scaffold_10: 7777570-7790154 Eutrema salsugineum
Thhalv10016731m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_10: 7777570-7787569 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375501 5261 Brassicaceae View MSA
123840734 5264 Brassicales-Malvales View MSA
124338432 5266 SBM View MSA
124241225 5268 Malvidae View MSA
124062960 5270 Rosid View MSA
123741192 5271 Pentapetalae View MSA
122797029 5272 Eudicot View MSA
122045305 5273 Angiosperm View MSA
121346397 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain