Gene : Thhalv10016690m.g E. salsugineum v1.0
Defline:  (1 of 6) PTHR11879//PTHR11879:SF18 - ASPARTATE AMINOTRANSFERASE Genomic Order:  435
Name:  ? Thhalv10016690m.g Secondary Identifier:  ? PAC:20181371
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum ASPARTATE-DEG1-PWY Eutrema salsugineum pathologic  
Esalsugineum ASPARTATESYN-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-3001 Eutrema salsugineum pathologic  
Esalsugineum PWY-7115 Eutrema salsugineum pathologic  
Esalsugineum PWY-7117 Eutrema salsugineum pathologic  
Esalsugineum THRESYN-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10016690m.g 0.5kb upstream 0.5kb upstream 3947 true scaffold_10: 5960978-5964924 Eutrema salsugineum
Thhalv10016690m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_10: 5960978-5961477 Eutrema salsugineum
Thhalv10016690m.g 0.5kb downstream 0.5kb downstream 3947 true scaffold_10: 5961478-5965424 Eutrema salsugineum
Thhalv10016690m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_10: 5964925-5965424 Eutrema salsugineum
Thhalv10016690m.g 1.0kb upstream 1.0kb upstream 4447 true scaffold_10: 5960478-5964924 Eutrema salsugineum
Thhalv10016690m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_10: 5960478-5961477 Eutrema salsugineum
Thhalv10016690m.g 1.0kb downstream 1.0kb downstream 4447 true scaffold_10: 5961478-5965924 Eutrema salsugineum
Thhalv10016690m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_10: 5964925-5965924 Eutrema salsugineum
Thhalv10016690m.g 2.0kb upstream 2.0kb upstream 5447 true scaffold_10: 5959478-5964924 Eutrema salsugineum
Thhalv10016690m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_10: 5959478-5961477 Eutrema salsugineum
Thhalv10016690m.g 2.0kb downstream 2.0kb downstream 5447 true scaffold_10: 5961478-5966924 Eutrema salsugineum
Thhalv10016690m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_10: 5964925-5966924 Eutrema salsugineum
Thhalv10016690m.g 5.0kb upstream 5.0kb upstream 8447 true scaffold_10: 5956478-5964924 Eutrema salsugineum
Thhalv10016690m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_10: 5956478-5961477 Eutrema salsugineum
Thhalv10016690m.g 5.0kb downstream 5.0kb downstream 8447 true scaffold_10: 5961478-5969924 Eutrema salsugineum
Thhalv10016690m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_10: 5964925-5969924 Eutrema salsugineum
Thhalv10016690m.g 10.0kb upstream 10.0kb upstream 13447 true scaffold_10: 5951478-5964924 Eutrema salsugineum
Thhalv10016690m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_10: 5951478-5961477 Eutrema salsugineum
Thhalv10016690m.g 10.0kb downstream 10.0kb downstream 13447 true scaffold_10: 5961478-5974924 Eutrema salsugineum
Thhalv10016690m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_10: 5964925-5974924 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368520 5261 Brassicaceae View MSA
123839385 5264 Brassicales-Malvales View MSA
124344803 5266 SBM View MSA
124241659 5268 Malvidae View MSA
124063482 5270 Rosid View MSA
123737145 5271 Pentapetalae View MSA
122793092 5272 Eudicot View MSA
122046072 5273 Angiosperm View MSA
121344214 5274 Embryophyte View MSA
123424622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain