Gene : Thhalv10016845m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR31689:SF0 - DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC Genomic Order:  1090
Name:  ? Thhalv10016845m.g Secondary Identifier:  ? PAC:20180443
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5097 Eutrema salsugineum pathologic  
Esalsugineum PWY-724 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10016845m.g 0.5kb upstream 0.5kb upstream 2754 true scaffold_10: 9215442-9218195 Eutrema salsugineum
Thhalv10016845m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_10: 9215442-9215941 Eutrema salsugineum
Thhalv10016845m.g 0.5kb downstream 0.5kb downstream 2754 true scaffold_10: 9215942-9218695 Eutrema salsugineum
Thhalv10016845m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_10: 9218196-9218695 Eutrema salsugineum
Thhalv10016845m.g 1.0kb upstream 1.0kb upstream 3254 true scaffold_10: 9214942-9218195 Eutrema salsugineum
Thhalv10016845m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_10: 9214942-9215941 Eutrema salsugineum
Thhalv10016845m.g 1.0kb downstream 1.0kb downstream 3254 true scaffold_10: 9215942-9219195 Eutrema salsugineum
Thhalv10016845m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_10: 9218196-9219195 Eutrema salsugineum
Thhalv10016845m.g 2.0kb upstream 2.0kb upstream 4254 true scaffold_10: 9213942-9218195 Eutrema salsugineum
Thhalv10016845m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_10: 9213942-9215941 Eutrema salsugineum
Thhalv10016845m.g 2.0kb downstream 2.0kb downstream 4254 true scaffold_10: 9215942-9220195 Eutrema salsugineum
Thhalv10016845m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_10: 9218196-9220195 Eutrema salsugineum
Thhalv10016845m.g 5.0kb upstream 5.0kb upstream 7254 true scaffold_10: 9210942-9218195 Eutrema salsugineum
Thhalv10016845m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_10: 9210942-9215941 Eutrema salsugineum
Thhalv10016845m.g 5.0kb downstream 5.0kb downstream 7254 true scaffold_10: 9215942-9223195 Eutrema salsugineum
Thhalv10016845m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_10: 9218196-9223195 Eutrema salsugineum
Thhalv10016845m.g 10.0kb upstream 10.0kb upstream 12254 true scaffold_10: 9205942-9218195 Eutrema salsugineum
Thhalv10016845m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_10: 9205942-9215941 Eutrema salsugineum
Thhalv10016845m.g 10.0kb downstream 10.0kb downstream 12254 true scaffold_10: 9215942-9228195 Eutrema salsugineum
Thhalv10016845m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_10: 9218196-9228195 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122359876 5261 Brassicaceae View MSA
123838616 5264 Brassicales-Malvales View MSA
124341400 5266 SBM View MSA
124243364 5268 Malvidae View MSA
124061653 5270 Rosid View MSA
123740208 5271 Pentapetalae View MSA
122785704 5272 Eudicot View MSA
122047257 5273 Angiosperm View MSA
121347599 5274 Embryophyte View MSA
123423863 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain