Gene : Thhalv10016970m.g E. salsugineum v1.0
Defline:  (1 of 3) PTHR11071//PTHR11071:SF291 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Genomic Order:  294
Name:  ? Thhalv10016970m.g Secondary Identifier:  ? PAC:20179728
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10016970m.g 0.5kb upstream 0.5kb upstream 4218 true scaffold_10: 5060411-5064628 Eutrema salsugineum
Thhalv10016970m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_10: 5064129-5064628 Eutrema salsugineum
Thhalv10016970m.g 0.5kb downstream 0.5kb downstream 4218 true scaffold_10: 5059911-5064128 Eutrema salsugineum
Thhalv10016970m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_10: 5059911-5060410 Eutrema salsugineum
Thhalv10016970m.g 1.0kb upstream 1.0kb upstream 4718 true scaffold_10: 5060411-5065128 Eutrema salsugineum
Thhalv10016970m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_10: 5064129-5065128 Eutrema salsugineum
Thhalv10016970m.g 1.0kb downstream 1.0kb downstream 4718 true scaffold_10: 5059411-5064128 Eutrema salsugineum
Thhalv10016970m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_10: 5059411-5060410 Eutrema salsugineum
Thhalv10016970m.g 2.0kb upstream 2.0kb upstream 5718 true scaffold_10: 5060411-5066128 Eutrema salsugineum
Thhalv10016970m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_10: 5064129-5066128 Eutrema salsugineum
Thhalv10016970m.g 2.0kb downstream 2.0kb downstream 5718 true scaffold_10: 5058411-5064128 Eutrema salsugineum
Thhalv10016970m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_10: 5058411-5060410 Eutrema salsugineum
Thhalv10016970m.g 5.0kb upstream 5.0kb upstream 8718 true scaffold_10: 5060411-5069128 Eutrema salsugineum
Thhalv10016970m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_10: 5064129-5069128 Eutrema salsugineum
Thhalv10016970m.g 5.0kb downstream 5.0kb downstream 8718 true scaffold_10: 5055411-5064128 Eutrema salsugineum
Thhalv10016970m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_10: 5055411-5060410 Eutrema salsugineum
Thhalv10016970m.g 10.0kb upstream 10.0kb upstream 13718 true scaffold_10: 5060411-5074128 Eutrema salsugineum
Thhalv10016970m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_10: 5064129-5074128 Eutrema salsugineum
Thhalv10016970m.g 10.0kb downstream 10.0kb downstream 13718 true scaffold_10: 5050411-5064128 Eutrema salsugineum
Thhalv10016970m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_10: 5050411-5060410 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122356736 5261 Brassicaceae Singleton cluster - no MSA
123794834 5264 Brassicales-Malvales Singleton cluster - no MSA
124292631 5266 SBM Singleton cluster - no MSA
124145382 5268 Malvidae Singleton cluster - no MSA
123871786 5270 Rosid Singleton cluster - no MSA
123455984 5271 Pentapetalae Singleton cluster - no MSA
122491415 5272 Eudicot Singleton cluster - no MSA
122041792 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121346769 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain